IMem-2LSAAC: a two-level model for discrimination of membrane proteins and their types by extending the notion of SAAC into Chou's pseudo amino acid composition (Q1649407): Difference between revisions

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scientific article

Language	Label	Description	Also known as
English	IMem-2LSAAC: a two-level model for discrimination of membrane proteins and their types by extending the notion of SAAC into Chou's pseudo amino acid composition	scientific article

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scholarly article

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title

IMem-2LSAAC: a two-level model for discrimination of membrane proteins and their types by extending the notion of SAAC into Chou's pseudo amino acid composition (English)

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Journal of Theoretical Biology

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publication date

6 July 2018

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zbMATH Keywords

membrane proteins

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SAAC

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PseAAC

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SVM

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describes a project that uses

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MaRDI publication profile

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full work available at URL

https://doi.org/10.1016/j.jtbi.2018.01.008

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cites work

Classification of membrane protein types using voting feature interval in combination with Chou's pseudo amino acid composition

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Random forests

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Some remarks on protein attribute prediction and pseudo amino acid composition

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Gene selection for cancer classification using support vector machines

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A two-stage SVM method to predict membrane protein types by incorporating amino acid classifications and physicochemical properties into a general form of Chou's PseAAC

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Predicting membrane protein types by fusing composite protein sequence features into pseudo amino acid composition

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MemHyb: predicting membrane protein types by hybridizing SAAC and PSSM

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pSuc-Lys: predict lysine succinylation sites in proteins with PseAAC and ensemble random forest approach

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Discrimination of acidic and alkaline enzyme using Chou's pseudo amino acid composition in conjunction with probabilistic neural network model

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The modified Mahalanobis discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition

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Application of density similarities to predict membrane protein types based on pseudo-amino acid composition

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Q4398828

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On Estimation of a Probability Density Function and Mode

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Fuzzy KNN for predicting membrane protein types from pseudo-amino acid composition

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SLLE for predicting membrane protein types

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Identifiers

zbMATH Open document ID

1397.92180

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DOI

10.1016/j.jtbi.2018.01.008

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Mathematics Subject Classification ID

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Sitelinks

Mathematics(1 entry)

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+Some remarks on protein attribute prediction and pseudo amino acid composition
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+A two-stage SVM method to predict membrane protein types by incorporating amino acid classifications and physicochemical properties into a general form of Chou's PseAAC
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+Predicting membrane protein types by fusing composite protein sequence features into pseudo amino acid composition
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+pSuc-Lys: predict lysine succinylation sites in proteins with PseAAC and ensemble random forest approach
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+Discrimination of acidic and alkaline enzyme using Chou's pseudo amino acid composition in conjunction with probabilistic neural network model
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+The modified Mahalanobis discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition
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