Poisson-Nernst-Planck systems for ion flow with density functional theory for hard-sphere potential: I-V relations and critical potentials. II: Numerics (Q1935034): Difference between revisions

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Normal rank
Property / cites work
 
Property / cites work: Asymptotic Expansions of I-V Relations via a Poisson–Nernst–Planck System / rank
 
Normal rank
Property / cites work
 
Property / cites work: Ion Flow through Narrow Membrane Channels: Part I / rank
 
Normal rank
Property / cites work
 
Property / cites work: Ion Flow through Narrow Membrane Channels: Part II / rank
 
Normal rank
Property / cites work
 
Property / cites work: Qualitative Properties of Steady-State Poisson--Nernst--Planck Systems: Perturbation and Simulation Study / rank
 
Normal rank
Property / cites work
 
Property / cites work: Inverse Problems Related to Ion Channel Selectivity / rank
 
Normal rank
Property / cites work
 
Property / cites work: Discrete-state model of coupled ion permeation and fast gating in ClC chloride channels / rank
 
Normal rank
Property / cites work
 
Property / cites work: Poisson–Nernst–Planck Systems for Ion Channels with Permanent Charges / rank
 
Normal rank
Property / cites work
 
Property / cites work: Two- and three-dimensional Poisson--Nernst--Planck simulations of current flow through gramicidin A / rank
 
Normal rank
Property / cites work
 
Property / cites work: A mathematical model for the hard sphere repulsion in ionic solutions / rank
 
Normal rank
Property / cites work
 
Property / cites work: Continuum solvation model: Computation of electrostatic forces from numerical solutions to the Poisson-Boltzmann equation / rank
 
Normal rank
Property / cites work
 
Property / cites work: Poisson-Nernst-Planck systems for ion flow with density functional theory for hard-sphere potential: I-V relations and critical potentials. I: Analysis / rank
 
Normal rank
Property / cites work
 
Property / cites work: A BVP solver based on residual control and the Maltab PSE / rank
 
Normal rank
Property / cites work
 
Property / cites work: Geometric Singular Perturbation Approach to Steady-State Poisson--Nernst--Planck Systems / rank
 
Normal rank
Property / cites work
 
Property / cites work: One-dimensional steady-state Poisson-Nernst-Planck systems for ion channels with multiple ion species / rank
 
Normal rank
Property / cites work
 
Property / cites work: Qualitative Properties of Steady-State Poisson--Nernst--Planck Systems: Mathematical Study / rank
 
Normal rank
Property / cites work
 
Property / cites work: On the relationship between the density functional formalism and the potential distribution theory for nonuniform fluids / rank
 
Normal rank
Property / cites work
 
Property / cites work: A Poisson–Nernst–Planck Model for Biological Ion Channels—An Asymptotic Analysis in a Three-Dimensional Narrow Funnel / rank
 
Normal rank
Property / cites work
 
Property / cites work: Singular perturbation analysis of the steady-state Poisson–Nernst–Planck system: Applications to ion channels / rank
 
Normal rank
Property / cites work
 
Property / cites work: Asymptotic Analysis of the Current-Voltage Curve of a <i>pnpn</i> Semiconductor Device / rank
 
Normal rank
Property / cites work
 
Property / cites work: A Bifurcation Analysis of the One-Dimensional Steady-State Semiconductor Device Equations / rank
 
Normal rank

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Poisson-Nernst-Planck systems for ion flow with density functional theory for hard-sphere potential: I-V relations and critical potentials. II: Numerics
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    Poisson-Nernst-Planck systems for ion flow with density functional theory for hard-sphere potential: I-V relations and critical potentials. II: Numerics (English)
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    30 January 2013
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    In this paper, the one dimensional steady-state Poisson-Nernst-Planck (PNP) type model for ionic flow through membrane channels is considered. Improving the classical PNP models where ion species are treated as point charges, this model includes ionic interaction due to finite sizes of ion species modeled by hard sphere potential from the Density Functional Theory (DFT). The resulting problem is a singularly perturbed boundary value problem of an integro-differential system. It is investigated the ion size effect on the current-voltage (I-V) relations numerically, focusing on the case where two oppositely charged ion species are involved and only the hard sphere components of the excess chemical potentials are included. Two numerical tasks are considered. The first one is a numerical approach of solving the boundary value problem and obtaining I-V curves. The second task is to numerically detect two critical potential values \(V_c\) and \(V^c\) which existence was theoretically proved early. It is proposed an algorithm of numerical detection of \(V_c\) and \(V^c\) without using any analytical formulas but based on the defining properties and numerical I-V curves directly. Numerical values for \(V_c\) and \(V^c\) agree well with the analytical predictions. For a setting including a nonzero permanent charge in which case no analytic formula for the I-V relation is available, the proposed algorithm can still be applied to find \(V_c\) and \(V^c\) numerically. Part I, see J. Dyn. Differ. Equations 24, No. 4, 955--983 (2012; Zbl 1270.93011).
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    ion flow
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    PNP-DFT
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    hard-sphere
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    I-V relation
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    critical potential
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