phytools (Q21979): Difference between revisions
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Removed claim: copyright license (P163): GNU General Public License, version 3.0 (Q56621) |
Swh import (talk | contribs) SWHID from Software Heritage |
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publication date: 20 August 2011
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publication date: 17 October 2011
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publication date: 27 November 2011
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publication date: 18 December 2011
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publication date: 11 January 2012
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publication date: 27 February 2012
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publication date: 2 May 2012
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publication date: 8 August 2012
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publication date: 29 September 2012
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publication date: 13 November 2012
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publication date: 17 February 2013
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publication date: 20 March 2013
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publication date: 8 April 2013
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publication date: 20 April 2013
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publication date: 22 May 2013
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publication date: 31 May 2013
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publication date: 30 June 2013
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publication date: 16 July 2013
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publication date: 3 March 2014
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publication date: 25 October 2013
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publication date: 3 March 2014
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publication date: 5 May 2014
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publication date: 28 June 2014
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publication date: 26 August 2014
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publication date: 5 February 2015
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publication date: 29 April 2015
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publication date: 10 July 2015
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publication date: 25 September 2015
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publication date: 10 December 2015
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publication date: 6 March 2016
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publication date: 24 June 2016
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publication date: 5 December 2016
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publication date: 28 March 2017
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publication date: 28 July 2017
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publication date: 12 November 2017
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publication date: 28 September 2018
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publication date: 18 June 2019
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publication date: 19 March 2020
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publication date: 1 June 2020
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publication date: 20 September 2020
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publication date: 3 June 2021
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publication date: 25 September 2021
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publication date: 3 January 2022
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publication date: 5 April 2022
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publication date: 1 September 2022
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publication date: 14 July 2023
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publication date: 9 November 2023
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publication date: 9 January 2024
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A wide range of methods for phylogenetic analysis - concentrated in phylogenetic comparative biology, but also including numerous techniques for visualizing, analyzing, manipulating, reading or writing, and even inferring phylogenetic trees. Included among the functions in phylogenetic comparative biology are various for ancestral state reconstruction, model-fitting, and simulation of phylogenies and trait data. A broad range of plotting methods for phylogenies and comparative data include (but are not restricted to) methods for mapping trait evolution on trees, for projecting trees into phenotype space or a onto a geographic map, and for visualizing correlated speciation between trees. Lastly, numerous functions are designed for reading, writing, analyzing, inferring, simulating, and manipulating phylogenetic trees and comparative data. For instance, there are functions for computing consensus phylogenies from a set, for simulating phylogenetic trees and data under a range of models, for randomly or non-randomly attaching species or clades to a tree, as well as for a wide range of other manipulations and analyses that phylogenetic biologists might find useful in their research. | |||||||||||||||
Property / description: A wide range of methods for phylogenetic analysis - concentrated in phylogenetic comparative biology, but also including numerous techniques for visualizing, analyzing, manipulating, reading or writing, and even inferring phylogenetic trees. Included among the functions in phylogenetic comparative biology are various for ancestral state reconstruction, model-fitting, and simulation of phylogenies and trait data. A broad range of plotting methods for phylogenies and comparative data include (but are not restricted to) methods for mapping trait evolution on trees, for projecting trees into phenotype space or a onto a geographic map, and for visualizing correlated speciation between trees. Lastly, numerous functions are designed for reading, writing, analyzing, inferring, simulating, and manipulating phylogenetic trees and comparative data. For instance, there are functions for computing consensus phylogenies from a set, for simulating phylogenetic trees and data under a range of models, for randomly or non-randomly attaching species or clades to a tree, as well as for a wide range of other manipulations and analyses that phylogenetic biologists might find useful in their research. / rank | |||||||||||||||
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Property / author: Liam J. Revell / rank | |||||||||||||||
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Property / copyright license: GNU General Public License, version 2.0 / rank | |||||||||||||||
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Property / copyright license: GNU General Public License, version 3.0 / rank | |||||||||||||||
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edition/version: expanded from: GPL (≥ 2) (English) | |||||||||||||||
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software version identifier: ≥ 5.7 | |||||||||||||||
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software version identifier: ≥ 3.5.0 | |||||||||||||||
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point in time: 16 January 2024
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Latest revision as of 16:30, 21 March 2024
Phylogenetic Tools for Comparative Biology (and Other Things)
Language | Label | Description | Also known as |
---|---|---|---|
English | phytools |
Phylogenetic Tools for Comparative Biology (and Other Things) |
Statements
9 January 2024
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A wide range of methods for phylogenetic analysis - concentrated in phylogenetic comparative biology, but also including numerous techniques for visualizing, analyzing, manipulating, reading or writing, and even inferring phylogenetic trees. Included among the functions in phylogenetic comparative biology are various for ancestral state reconstruction, model-fitting, and simulation of phylogenies and trait data. A broad range of plotting methods for phylogenies and comparative data include (but are not restricted to) methods for mapping trait evolution on trees, for projecting trees into phenotype space or a onto a geographic map, and for visualizing correlated speciation between trees. Lastly, numerous functions are designed for reading, writing, analyzing, inferring, simulating, and manipulating phylogenetic trees and comparative data. For instance, there are functions for computing consensus phylogenies from a set, for simulating phylogenetic trees and data under a range of models, for randomly or non-randomly attaching species or clades to a tree, as well as for a wide range of other manipulations and analyses that phylogenetic biologists might find useful in their research.
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expanded from: GPL (≥ 2) (English)
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