Full-Text Indexes for High-Throughput Sequencing (Q3305517): Difference between revisions

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+Replacing suffix trees with enhanced suffix arrays
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+Lightweight LCP Construction for Next-Generation Sequencing Datasets
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+Lightweight algorithms for constructing and inverting the BWT of string collections
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+A Constant-Space Comparison-Based Algorithm for Computing the Burrows–Wheeler Transform
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+On the sorting-complexity of suffix tree construction
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+The exact online string matching problem
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+Indexing compressed text
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+Lightweight data indexing and compression in external memory
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+Data structures and algorithms for approximate string matching
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+A comparison of imperative and purely functional suffix tree constructions
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+Compressed Suffix Arrays and Suffix Trees with Applications to Text Indexing and String Matching
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+Algorithms on Strings, Trees and Sequences
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+Error Detecting and Error Correcting Codes
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+A space and time efficient algorithm for constructing compressed suffix arrays
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+External Memory Generalized Suffix and LCP Arrays Construction
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+Suffix Arrays: A New Method for On-Line String Searches
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+An extension of the Burrows-Wheeler transform
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+An analysis of the Burrows—Wheeler transform
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+A Space-Economical Suffix Tree Construction Algorithm
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+Compressed representations of sequences and full-text indexes
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+On-line construction of suffix trees
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