Multifidelity multilevel Monte Carlo to accelerate approximate Bayesian parameter inference for partially observed stochastic processes (Q2675612): Difference between revisions

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English	Multifidelity multilevel Monte Carlo to accelerate approximate Bayesian parameter inference for partially observed stochastic processes	scientific article

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scholarly article

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title

Multifidelity multilevel Monte Carlo to accelerate approximate Bayesian parameter inference for partially observed stochastic processes (English)

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Journal of Computational Physics

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publication date

24 September 2022

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full work available at URL

https://arxiv.org/abs/2110.14082

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zbMATH Keywords

Bayesian inference

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approximate Bayesian computation

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multifidelity rejection sampling

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multilevel Monte Carlo

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partially observed Markov processes

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biochemical reaction networks

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describes a project that uses

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MaRDI publication profile

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cites work

Bayesian estimation of incompletely observed diffusions

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Bayesian model selection for partially observed diffusion models

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Self-induced stochastic resonance in excitable systems

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Q2873072

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Equation of State Calculations by Fast Computing Machines

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Monte Carlo sampling methods using Markov chains and their applications

0 references

Sequential Monte Carlo Samplers

0 references

The pseudo-marginal approach for efficient Monte Carlo computations

0 references

Particle Markov Chain Monte Carlo Methods

0 references

Robust Bayesian Synthetic Likelihood via a Semi-Parametric Approach

0 references

Variational Bayes with synthetic likelihood

0 references

Bayesian Synthetic Likelihood

0 references

The frontier of simulation-based inference

0 references

Sequential Monte Carlo without likelihoods

0 references

An adaptive sequential Monte Carlo method for approximate Bayesian computation

0 references

Estimation of Parameters for Macroparasite Population Evolution Using Approximate Bayesian Computation

0 references

Accelerating sequential Monte Carlo with surrogate likelihoods

0 references

Delayed acceptance particle MCMC for exact inference in stochastic kinetic models

0 references

Lazy ABC

0 references

Transport Map Accelerated Markov Chain Monte Carlo

0 references

Rapid Bayesian Inference for Expensive Stochastic Models

0 references

Multifidelity Approximate Bayesian Computation

0 references

Multifidelity Approximate Bayesian Computation with Sequential Monte Carlo Parameter Sampling

0 references

Optimal Model Management for Multifidelity Monte Carlo Estimation

0 references

Monte Carlo complexity of global solution of integral equations

0 references

Multilevel Monte Carlo Methods

0 references

Multilevel Monte Carlo Path Simulation

0 references

Multilevel Monte Carlo for Continuous Time Markov Chains, with Applications in Biochemical Kinetics

0 references

Extending the multi-level method for the simulation of stochastic biological systems

0 references

A Hierarchical Multilevel Markov Chain Monte Carlo Algorithm with Applications to Uncertainty Quantification in Subsurface Flow

0 references

Multilevel Markov Chain Monte Carlo

0 references

Multilevel Markov Chain Monte Carlo Method for High-Contrast Single-Phase Flow Problems

0 references

Multilevel sequential Monte Carlo samplers

0 references

Multilevel sequential Monte Carlo for Bayesian inverse problems

0 references

Multilevel approximate Bayesian approaches for flows in highly heterogeneous porous media and their applications

0 references

Multilevel Monte Carlo in approximate Bayesian computation

0 references

Multilevel rejection sampling for approximate Bayesian computation

0 references

Approximation and inference methods for stochastic biochemical kinetics—a tutorial review

0 references

Modeling and Simulating Chemical Reactions

0 references

Error analysis of tau-leap simulation methods

0 references

Multilevel Monte Carlo Approximation of Distribution Functions and Densities

0 references

Constructing Summary Statistics for Approximate Bayesian Computation: Semi-Automatic Approximate Bayesian Computation

0 references

Unbiased Estimation with Square Root Convergence for SDE Models

0 references

Survey of Multifidelity Methods in Uncertainty Propagation, Inference, and Optimization

0 references

Stochastics. Introduction to probability and statistics. Translated by Marcel Ortgiese, Ellen Baake, and the author.

0 references

Bayesian Static Parameter Estimation for Partially Observed Diffusions via Multilevel Monte Carlo

0 references

Approximate Bayesian computation and simulation-based inference for complex stochastic epidemic models

0 references

Bayesian model discrimination for partially-observed epidemic models

0 references

Approximate Bayesian model inversion for PDEs with heterogeneous and state-dependent coefficients

0 references

AABC: approximate approximate Bayesian computation for inference in population-genetic models

0 references

Deep UQ: learning deep neural network surrogate models for high dimensional uncertainty quantification

0 references

Gaussian process enhanced semi-automatic approximate Bayesian computation: parameter inference in a stochastic differential equation system for chemotaxis

0 references

Adaptive approximate Bayesian computation

0 references

On Array-RQMC for Markov Chains: Mapping Alternatives and Convergence Rates

0 references

Variance reduction with array-RQMC for tau-leaping simulation of stochastic biological and chemical reaction networks

0 references

Quasi-Monte Carlo methods applied to tau-leaping in stochastic biological systems

0 references

SIMD parallel MCMC sampling with applications for big-data Bayesian analytics

0 references

Identifiers

DOI

10.1016/j.jcp.2022.111543

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Mathematics Subject Classification ID

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Sitelinks

Mathematics(1 entry)

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@@ Property / cites work @@
+Bayesian estimation of incompletely observed diffusions
+Normal rank
@@ Property / cites work @@
+Bayesian model selection for partially observed diffusion models
+Normal rank
@@ Property / cites work @@
+Self-induced stochastic resonance in excitable systems
+Normal rank
@@ Property / cites work @@
+Q2873072
@@ Property / cites work: Q2873072 / rank @@
+Normal rank
@@ Property / cites work @@
+Equation of State Calculations by Fast Computing Machines
+Normal rank
@@ Property / cites work @@
+Monte Carlo sampling methods using Markov chains and their applications
+Normal rank
@@ Property / cites work @@
+Sequential Monte Carlo Samplers
@@ Property / cites work: Sequential Monte Carlo Samplers / rank @@
+Normal rank
@@ Property / cites work @@
+The pseudo-marginal approach for efficient Monte Carlo computations
+Normal rank
@@ Property / cites work @@
+Particle Markov Chain Monte Carlo Methods
@@ Property / cites work: Particle Markov Chain Monte Carlo Methods / rank @@
+Normal rank
@@ Property / cites work @@
+Robust Bayesian Synthetic Likelihood via a Semi-Parametric Approach
+Normal rank
@@ Property / cites work @@
+Variational Bayes with synthetic likelihood
@@ Property / cites work: Variational Bayes with synthetic likelihood / rank @@
+Normal rank
@@ Property / cites work @@
+Bayesian Synthetic Likelihood
@@ Property / cites work: Bayesian Synthetic Likelihood / rank @@
+Normal rank
@@ Property / cites work @@
+The frontier of simulation-based inference
@@ Property / cites work: The frontier of simulation-based inference / rank @@
+Normal rank
@@ Property / cites work @@
+Sequential Monte Carlo without likelihoods
@@ Property / cites work: Sequential Monte Carlo without likelihoods / rank @@
+Normal rank
@@ Property / cites work @@
+An adaptive sequential Monte Carlo method for approximate Bayesian computation
+Normal rank
@@ Property / cites work @@
+Estimation of Parameters for Macroparasite Population Evolution Using Approximate Bayesian Computation
+Normal rank
@@ Property / cites work @@
+Accelerating sequential Monte Carlo with surrogate likelihoods
+Normal rank
@@ Property / cites work @@
+Delayed acceptance particle MCMC for exact inference in stochastic kinetic models
+Normal rank
@@ Property / cites work @@
+Lazy ABC
@@ Property / cites work: Lazy ABC / rank @@
+Normal rank
@@ Property / cites work @@
+Transport Map Accelerated Markov Chain Monte Carlo
+Normal rank
@@ Property / cites work @@
+Rapid Bayesian Inference for Expensive Stochastic Models
+Normal rank
@@ Property / cites work @@
+Multifidelity Approximate Bayesian Computation
@@ Property / cites work: Multifidelity Approximate Bayesian Computation / rank @@
+Normal rank
@@ Property / cites work @@
+Multifidelity Approximate Bayesian Computation with Sequential Monte Carlo Parameter Sampling
+Normal rank
@@ Property / cites work @@
+Optimal Model Management for Multifidelity Monte Carlo Estimation
+Normal rank
@@ Property / cites work @@
+Monte Carlo complexity of global solution of integral equations
+Normal rank
@@ Property / cites work @@
+Multilevel Monte Carlo Methods
@@ Property / cites work: Multilevel Monte Carlo Methods / rank @@
+Normal rank
@@ Property / cites work @@
+Multilevel Monte Carlo Path Simulation
@@ Property / cites work: Multilevel Monte Carlo Path Simulation / rank @@
+Normal rank
@@ Property / cites work @@
+Multilevel Monte Carlo for Continuous Time Markov Chains, with Applications in Biochemical Kinetics
+Normal rank
@@ Property / cites work @@
+Extending the multi-level method for the simulation of stochastic biological systems
+Normal rank
@@ Property / cites work @@
+A Hierarchical Multilevel Markov Chain Monte Carlo Algorithm with  Applications to Uncertainty Quantification in Subsurface Flow
+Normal rank
@@ Property / cites work @@
+Multilevel Markov Chain Monte Carlo
@@ Property / cites work: Multilevel Markov Chain Monte Carlo / rank @@
+Normal rank
@@ Property / cites work @@
+Multilevel Markov Chain Monte Carlo Method for High-Contrast Single-Phase Flow Problems
+Normal rank
@@ Property / cites work @@
+Multilevel sequential Monte Carlo samplers
@@ Property / cites work: Multilevel sequential Monte Carlo samplers / rank @@
+Normal rank
@@ Property / cites work @@
+Multilevel sequential Monte Carlo for Bayesian inverse problems
+Normal rank
@@ Property / cites work @@
+Multilevel approximate Bayesian approaches for flows in highly heterogeneous porous media and their applications
+Normal rank
@@ Property / cites work @@
+Multilevel Monte Carlo in approximate Bayesian computation
+Normal rank
@@ Property / cites work @@
+Multilevel rejection sampling for approximate Bayesian computation
+Normal rank
@@ Property / cites work @@
+Approximation and inference methods for stochastic biochemical kinetics—a tutorial review
+Normal rank
@@ Property / cites work @@
+Modeling and Simulating Chemical Reactions
@@ Property / cites work: Modeling and Simulating Chemical Reactions / rank @@
+Normal rank
@@ Property / cites work @@
+Error analysis of tau-leap simulation methods
@@ Property / cites work: Error analysis of tau-leap simulation methods / rank @@
+Normal rank
@@ Property / cites work @@
+Multilevel Monte Carlo Approximation of Distribution Functions and Densities
+Normal rank
@@ Property / cites work @@
+Constructing Summary Statistics for Approximate Bayesian Computation: Semi-Automatic Approximate Bayesian Computation
+Normal rank
@@ Property / cites work @@
+Unbiased Estimation with Square Root Convergence for SDE Models
+Normal rank
@@ Property / cites work @@
+Survey of Multifidelity Methods in Uncertainty Propagation, Inference, and Optimization
+Normal rank
@@ Property / cites work @@
+Stochastics. Introduction to probability and statistics. Translated by Marcel Ortgiese, Ellen Baake, and the author.
+Normal rank
@@ Property / cites work @@
+Bayesian Static Parameter Estimation for Partially Observed Diffusions via Multilevel Monte Carlo
+Normal rank
@@ Property / cites work @@
+Approximate Bayesian computation and simulation-based inference for complex stochastic epidemic models
+Normal rank
@@ Property / cites work @@
+Bayesian model discrimination for partially-observed epidemic models
+Normal rank
@@ Property / cites work @@
+Approximate Bayesian model inversion for PDEs with heterogeneous and state-dependent coefficients
+Normal rank
@@ Property / cites work @@
+AABC: approximate approximate Bayesian computation for inference in population-genetic models
+Normal rank
@@ Property / cites work @@
+Deep UQ: learning deep neural network surrogate models for high dimensional uncertainty quantification
+Normal rank
@@ Property / cites work @@
+Gaussian process enhanced semi-automatic approximate Bayesian computation: parameter inference in a stochastic differential equation system for chemotaxis
+Normal rank
@@ Property / cites work @@
+Adaptive approximate Bayesian computation
@@ Property / cites work: Adaptive approximate Bayesian computation / rank @@
+Normal rank
@@ Property / cites work @@
+On Array-RQMC for Markov Chains: Mapping Alternatives and Convergence Rates
+Normal rank
@@ Property / cites work @@
+Variance reduction with array-RQMC for tau-leaping simulation of stochastic biological and chemical reaction networks
+Normal rank
@@ Property / cites work @@
+Quasi-Monte Carlo methods applied to tau-leaping in stochastic biological systems
+Normal rank
@@ Property / cites work @@
+SIMD parallel MCMC sampling with applications for big-data Bayesian analytics
+Normal rank