nat (Q27822): Difference between revisions
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Created claim: source code repository (P339): https://github.com/cran/nat, #quickstatements; #temporary_batch_1711027662947 |
Swh import (talk | contribs) SWHID from Software Heritage |
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| Property / Software Heritage ID: swh:1:snp:2db621bd1f63c39f1daed4b3430f8e1a8c307def / qualifier | |||||||||||||||
point in time: 18 February 2024
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Latest revision as of 16:13, 21 March 2024
NeuroAnatomy Toolbox for Analysis of 3D Image Data
| Language | Label | Description | Also known as |
|---|---|---|---|
| English | nat |
NeuroAnatomy Toolbox for Analysis of 3D Image Data |
Statements
5 February 2024
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NeuroAnatomy Toolbox (nat) enables analysis and visualisation of 3D biological image data, especially traced neurons. Reads and writes 3D images in NRRD and 'Amira' AmiraMesh formats and reads surfaces in 'Amira' hxsurf format. Traced neurons can be imported from and written to SWC and 'Amira' LineSet and SkeletonGraph formats. These data can then be visualised in 3D via 'rgl', manipulated including applying calculated registrations, e.g. using the 'CMTK' registration suite, and analysed. There is also a simple representation for neurons that have been subjected to 3D skeletonisation but not formally traced; this allows morphological comparison between neurons including searches and clustering (via the 'nat.nblast' extension package).
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Identifiers
18 February 2024
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