GCalignR (Q30647): Difference between revisions
From MaRDI portal
Created claim: source code repository (P339): https://github.com/cran/GCalignR, #quickstatements; #temporary_batch_1711027662947 |
Swh import (talk | contribs) SWHID from Software Heritage |
||||||||||||||
| Property / Software Heritage ID | |||||||||||||||
| Property / Software Heritage ID: swh:1:snp:4b2da2b923a9e0941e6e82405faed3b4e0270baa / rank | |||||||||||||||
Normal rank | |||||||||||||||
| Property / Software Heritage ID: swh:1:snp:4b2da2b923a9e0941e6e82405faed3b4e0270baa / qualifier | |||||||||||||||
| Property / Software Heritage ID: swh:1:snp:4b2da2b923a9e0941e6e82405faed3b4e0270baa / qualifier | |||||||||||||||
point in time: 27 January 2024
| |||||||||||||||
Latest revision as of 19:28, 21 March 2024
Simple Peak Alignment for Gas-Chromatography Data
| Language | Label | Description | Also known as |
|---|---|---|---|
| English | GCalignR |
Simple Peak Alignment for Gas-Chromatography Data |
Statements
22 January 2024
0 references
Aligns peak based on peak retention times and matches homologous peaks across samples. The underlying alignment procedure comprises three sequential steps. (1) Full alignment of samples by linear transformation of retention times to maximise similarity among homologous peaks (2) Partial alignment of peaks within a user-defined retention time window to cluster homologous peaks (3) Merging rows that are likely representing homologous substances (i.e. no sample shows peaks in both rows and the rows have similar retention time means). The algorithm is described in detail in Ottensmann et al., 2018 <doi:10.1371/journal.pone.0198311>.
0 references
