User:Daniel/Queries/Prefixes: Difference between revisions

Revision as of 10:19, 21 August 2024

This page collects information regarding prefixes used in SPARQL queries, with special attention to federated queries.

A brief selection of external SPARQL endpoints that are candidates for federation with the MaRDI portal endpoint.
Database name	endpoint URL	sample query involving the endpoint	sample federated query involving the endpoint	sample federated query involving the endpoint and MaRDI	MaRDI properties for the endpoint	comments
BioModels Database	https://www.ebi.ac.uk/rdf/services/sparql
DBLP	https://sparql.dblp.org/	Most cited authors in DBLP
FactGrid	https://database.factgrid.de/sparql	List of mathematicians, Map of mathematicians in Paris	draft with error (see ticket and allowlist)	(no variable matching) / with variable matching	FactGrid item ID (P316) FactGrid property ID (P41)	List of sample queries, FactGrid people with street addresses, Wikidata items with both FactGrid and zbMATH id, FactGrid ID statements in MaRDI
Helmholtz Knowledge Graph	https://sparql.unhide.helmholtz-metadaten.de/					background
NFDI4Culture	https://nfdi4culture.de/sparql	List of people				There is also https://nfdi.fiz-karlsruhe.de/sparql but it seems less active and less complete. Math at the Met
OpenStreetMap	https://sophox.org/sparql	Wikidata identifiers of OpenStreetMap place types				unstable
Wikidata	https://query.wikidata.org/	Candidate items for a zbMATH author ID statement in Wikidata				See also Wikidata:Lists/SPARQL endpoints
WikiPathways	http://sparql.wikipathways.org/sparql	Wikidata identifiers of WikiPathways metabolites
OpenBioDiv	https://graph.openbiodiv.net/sparql	List of predicates (159)				See also Synospecies

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 | WikiPathways || [http://sparql.wikipathways.org/sparql http://sparql.wikipathways.org/sparql] || [https://query.wikidata.org/#PREFIX%20wp%3A%20%20%20%20%3Chttp%3A%2F%2Fvocabularies.wikipathways.org%2Fwp%23%3E%0APREFIX%20dcterms%3A%20%3Chttp%3A%2F%2Fpurl.org%2Fdc%2Fterms%2F%3E%0ASELECT%20%2a%20WHERE%20%7B%0ASERVICE%20%3Chttp%3A%2F%2Fsparql.wikipathways.org%2Fsparql%3E%20%7B%0A%20%20%20%20%20%20%3Fwp_mb1%20wp%3AbdbWikidata%20%3Fmetabolite%20.%0A%20%20%20%20%20%20%3Fwp_mb1%20dcterms%3AisPartOf%20%3Finteraction%20.%0A%20%20%20%20%20%20%3Finteraction%20rdf%3Atype%20wp%3AInteraction%20.%0A%20%20%20%20%20%20%3Fwp_mb2%20dcterms%3AisPartOf%20%3Finteraction%20.%0A%20%20%20%20%20%20%3Fwp_mb2%20wp%3AbdbWikidata%20%3Fmetabolite2%20.%0A%20%20%20%20%20%20FILTER%20%28%3Fwp_mb1%20%21%3D%20%3Fwp_mb2%29%0A%20%20%20%20%7D%0A%20%20%7D%20LIMIT%2020 Wikidata identifiers of WikiPathways metabolites] ||  ||  ||  ||
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+|OpenBioDiv || [https://graph.openbiodiv.net/sparql https://graph.openbiodiv.net/sparql]  || [https://graph.openbiodiv.net/sparql?name=&infer=true&sameAs=true&query=select%20DISTINCT%20%3Fp%20where%20%7B%20%0A%09%3Fs%20%3Fp%20%3Fo%20.%0A%7D%20limit%201000%0A List of predicates (159)]  ||  ||  ||  || See also [https://synospecies.plazi.org/#Sadayoshia+acamar Synospecies]
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 |}