Modeling dependent gene expression

DOI10.1214/11-AOAS525zbMath1243.62038arXiv1206.6650WikidataQ38803187 ScholiaQ38803187MaRDI QIDQ439142

Donatello Telesca, Ralph S. Freedman, Giovanni Parmigiani, Peter Mueller

Publication date: 1 August 2012

Published in: The Annals of Applied Statistics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1206.6650

zbMATH Keywords

conditional independenceprobit modelsmicroarray dataprobability of expressionreciprocal graphsreversible jumps MCMC

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Bayesian inference (62F15) Biochemistry, molecular biology (92C40)

Related Items (6)

Reciprocal graphical models for integrative gene regulatory network analysis ⋮ Bayesian selection of graphical regulatory models ⋮ Modeling dependent gene expression ⋮ Incorporating biological information into linear models: a Bayesian approach to the selection of pathways and genes ⋮ Bayesian Analysis of Curves Shape Variation Through Registration and Regression ⋮ An Integrative Bayesian Modeling Approach to Imaging Genetics

Uses Software

• GOSim
• HdBCS

Cites Work

• Unnamed Item
• Unnamed Item
• Unnamed Item
• Reversible jump Markov chain Monte Carlo computation and Bayesian model determination
• Modeling dependent gene expression
• Multiple testing and error control in Gaussian graphical model selection
• Statistical analysis of network data. Methods and models
• Hyper Markov laws in the statistical analysis of decomposable graphical models
• Markov properties of nonrecursive causal models
• A nested unsupervised approach to identifying novel molecular subtypes
• Normative selection of Bayesian networks
• Sparse graphical models for exploring gene expression data
• An exploration of aspects of Bayesian multiple testing
• Experiments in stochastic computation for high-dimensional graphical models
• A hidden spatial-temporal Markov random field model for network-based analysis of time course gene expression data
• High-dimensional graphs and variable selection with the Lasso
• The centrality index of a graph
• Objective Bayesian model selection in Gaussian graphical models
• Multivariate Bayesian Variable Selection and Prediction
• Efficient Estimation of Ordered Probit Models
• A Statistical Framework for Expression-Based Molecular Classification in Cancer
• Decomposable graphical Gaussian model determination
• Bayesian Analysis of Binary and Polychotomous Response Data

This page was built for publication: Modeling dependent gene expression