A hidden spatial-temporal Markov random field model for network-based analysis of time course gene expression data

DOI10.1214/07-AOAS145SUPPzbMath1137.62081arXiv0803.3942MaRDI QIDQ2482987

Zhi Wei, Hongzhe Li

Publication date: 30 April 2008

Published in: The Annals of Applied Statistics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/0803.3942

zbMATH Keywords

differential expressionsimulationsundirected graphpathwayiterative conditional modes

Mathematics Subject Classification ID

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Uses Software

• KEGG
• DAVID

Cites Work

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• A multivariate empirical Bayes statistic for replicated microarray time course data
• A hidden spatial-temporal Markov random field model for network-based analysis of time course gene expression data
• Hidden Markov Models for Microarray Time Course Data in Multiple Biological Conditions
• Functional Hierarchical Models for Identifying Genes with Different Time‐Course Expression Profiles
• Calculating the Statistical Significance of Changes in Pathway Activity From Gene Expression Data
• Exploration, normalization, and summaries of high density oligonucleotide array probe level data

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