Structured hierarchical models for probabilistic inference from perturbation screening data

DOI10.1214/21-AOAS1580zbMath1498.62208WikidataQ114599205 ScholiaQ114599205MaRDI QIDQ2170453

Niko Beerenwinkel, Simon Dirmeier

Publication date: 5 September 2022

Published in: The Annals of Applied Statistics (Search for Journal in Brave)

zbMATH Keywords

Markov random fields; probabilistic models; hierarchical models; biological network; genetic perturbation screen; interventional data

Mathematics Subject Classification ID

62-08: Computational methods for problems pertaining to statistics

62P10: Applications of statistics to biology and medical sciences; meta analysis

62F15: Bayesian inference

62H22: Probabilistic graphical models

Uses Software

• edgeR
• PyMC
• STRING