swMATH23938MaRDI QIDQ35699FDOQ35699
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Official website: https://string-db.org/cgi/input.pl
Cited In (only showing first 100 items - show all)
- Prediction of key transcription factors during skin regeneration by combining gene expression data and regulatory network information analysis
- MetaGO
- Natalie 2.0: sparse global network alignment as a special case of quadratic assignment
- Network diffusion with centrality measures to identify disease-related genes
- Protein-protein interactions can be predicted using coiled coil co-evolution patterns
- A survey of computational methods in protein-protein interaction networks
- COXPRESdb
- Prioritization of candidate genes through Boolean networks
- Algorithms for drug sensitivity prediction
- An efficient exact algorithm for triangle listing in large graphs
- Computational cell biology. Methods and protocols
- Four algorithms to solve symmetric multi-type non-negative matrix tri-factorization problem
- A new centrality measure of nodes in multilayer networks under the framework of tensor computation
- A fast prize-collecting Steiner forest algorithm for functional analyses in biological networks
- Inter-variable correlation prediction with fuzzy connected-triples
- Random-walk based approximate \(k\)-nearest neighbors algorithm for diffusion state distance
- Massive datasets and machine learning for computational biomedicine: trends and challenges
- DeepText2GO
- GOLabeler
- ModuleDiscoverer
- NetSig
- NewGOA
- QAUST
- An improved graph Laplacian regularization method for identifying biomarkers of Alzheimer's disease
- Linked data for life sciences
- Network analysis of common differential genes identifies key genes and important modules underlying extracellular electron transfer processes
- The star degree centrality problem: a decomposition approach
- Evidence of Rentian Scaling of Functional Modules in Diverse Biological Networks
- NetCore
- Title not available (Why is that?)
- A novel graph clustering method with a greedy heuristic search algorithm for mining protein complexes from dynamic and static PPI networks
- A potential in silico antibody-antigen based diagnostic test for precise identification of \textit{Acinetobacter baumannii}
- Computational studies on Alzheimer's disease associated pathways and regulatory patterns using microarray gene expression and network data: revealed association with aging and other diseases
- Identification of Essential Proteins Using Induced Stars in Protein–Protein Interaction Networks
- Local search for constrained graph clustering in biological networks
- SPMGBA
- Structured hierarchical models for probabilistic inference from perturbation screening data
- CUBCO: Prediction of Protein Complexes Based on Min-cut Network Partitioning into Biclique Spanned Subgraphs
- TFisher: a powerful truncation and weighting procedure for combining \(p\)-values
- Network embedding: taxonomies, frameworks and applications
- Inferring pattern generators on networks
- Diffusion state distances: multitemporal analysis, fast algorithms, and applications to biological networks
- DIAMOnD
- NetMix2
- OncoKB
- SANTA
- A systems biology approach to understanding alcoholic liver disease molecular mechanism: the development of static and dynamic models
- SDTRLS: predicting drug-target interactions for complex diseases based on chemical substructures
- fabp4 is central to eight obesity associated genes: a functional gene network-based polymorphic study
- Human dopamine receptors interaction network (DRIN): a systems biology perspective on topology, stability and functionality of the network
- A bi-objective network design approach for discovering functional modules linking Golgi apparatus fragmentation and neuronal death
- Gene expression and protein-protein interaction data for identification of colon cancer related genes using \(f\)-information measures
- MSigDB
- NetMix2: unifying network propagation and altered subnetworks
- ProTranslator: zero-shot protein function prediction using textual description
- NetGO
- GOProFormer
- netNMF-sc
- MultiPredGO
- Symmetric NMTF
- A distance measure for large graphs based on prime graphs
- Reconstruction methods for networks: the case of economic and financial systems
- Finding gastric cancer related genes and clinical biomarkers for detection based on gene-gene interaction network
- On the robustness of the generalized fused Lasso to prior specifications
- DOMINO
- graph
- Natalie
- Cytoscape
- limma
- GO-TermFinder
- CFinder
- Pengines
- BioGRID
- BioNet
- GENECODIS
- KEGG
- BDAGL
- Reactome
- I-TASSER
- DAVID
- ROAST
- STITCH
- PreSPI
- WebGestalt
- HTSanalyzeR
- GOLEM
- IntAct
- UniProt
- ClueGO
- proSQLite
- GCTA
- PANTHER
- PubChem
- TFisher
- CentiServer
- Bio2RDF
- DrugBank
- ClusterViz
- DNRLMF-MDA
- DrugE-Rank
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