Protein-protein interactions can be predicted using coiled coil co-evolution patterns

DOI10.1016/J.JTBI.2016.11.001zbMATH Open1368.92128OpenAlexW2556440865WikidataQ46461324 ScholiaQ46461324MaRDI QIDQ2013542FDOQ2013542

Authors: Pablo Mier, Gregorio Alanis-Lobato, Miguel A. Andrade-Navarro 

Publication date: 8 August 2017

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2016.11.001

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zbMATH Keywords

protein-protein interactioncoiled coilcorrelated evolution

Mathematics Subject Classification ID

Problems related to evolution (92D15) Protein sequences, DNA sequences (92D20)

Cites Work

• A Mathematical Theory of Communication

Cited In (2)

• Inference of Protein-Protein Interactions by Using Co-evolutionary Information
• Predicting protein-protein interactions by fusing various Chou's pseudo components and using wavelet denoising approach

Uses Software

• MUSCLE
• UniProt
• STRING
• HIPPIE
• Paircoil2
• SOCKET
• InterPreTS

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