Prediction of protein functions using protein interaction data

DOI10.1007/978-3-540-24687-9_40MaRDI QIDQ5712610zbMATH OpenOpenAlexFDO

Authors Haemoon Jung, Kyungsook Han

Publication date 23 December 2005

Published in Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/b97988

Mathematics Subject Classification ID

Computational methods for problems pertaining to biology (92-08) Biochemistry, molecular biology (92C40)

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Cited in

(17)

• Integration of topological measures for eliminating non-specific interactions in protein interaction networks
• Semantic and layered protein function prediction from PPI networks
• Protein-protein interactions can be predicted using coiled coil co-evolution patterns
• Prediction of protein-protein interactions based on domain
• A new protein graph model for function prediction
• On network-based kernel methods for protein-protein interactions with applications in protein functions prediction
• Semantically assessing the reliability of protein interactions
• Protein function prediction based on data fusion and functional interrelationship
• Inference of protein function from the structure of interaction networks
• Predicting protein function by genomic data-mining
• Progressive clustering based method for protein function prediction
• Exploiting multi-layered information to iteratively predict protein functions
• Predicting protein interactions in human by homologous interactions in yeast
• Predicting protein functions from PPI networks using functional aggregation
• InterDB, a prediction-oriented protein interaction database for C. \;elegans
• Assessment of the reliability of protein-protein interactions and protein function prediction
• INFERRING PROTEIN-PROTEIN INTERACTIONS FROM MESSENGER RNA EXPRESSION PROFILES WITH SVM

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