Protein function prediction based on data fusion and functional interrelationship

DOI10.1016/J.MBS.2016.02.001MaRDI QIDQ259531zbMATH OpenOpenAlexWikidataFDO

Authors Jun Meng, Jael-Sanyanda Wekesa, Guan-Li Shi, Yu-Shi Luan

Publication date 11 March 2016

Published in Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.mbs.2016.02.001

zbMATH Keywords

bi-relational graphclassifier integrationmulti-label classificationPPItransductive learning

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Computational methods for problems pertaining to biology (92-08)

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Cites work

• scientific article; zbMATH DE number 1391397 (Why is no real title available?)
• BoosTexter: A boosting-based system for text categorization
• Support-vector networks

Cited in

(11)

• scientific article; zbMATH DE number 2033252 (Why is no real title available?)
• ProTranslator: zero-shot protein function prediction using textual description
• Predicting associations between proteins and multiple diseases
• Exploiting multi-layered information to iteratively predict protein functions
• Progressive clustering based method for protein function prediction
• Synergy of multi-label hierarchical ensembles, data fusion, and cost-sensitive methods for gene functional inference
• Disparate data fusion for protein phosphorylation prediction
• Deep neural learning based protein function prediction
• Identification of protein functions in mouse with a label space partition method
• Multi-relational learning, text mining, and semi-supervised learning for functional genomics
• Bayesian data integration and enrichment analysis for predicting gene function in malaria

Describes a project that uses

Uses Software

• BoosTexter

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