| Publication | Date of Publication | Type |
|---|
| Overcoming observation bias for cancer progression modeling | 2025-02-24 | Paper |
| Joint inference of exclusivity patterns and recurrent trajectories from tumor mutation trees: Source Data | 2023-04-11 | Dataset |
| The Bourque distances for mutation trees of cancers | 2023-02-07 | Paper |
Structured hierarchical models for probabilistic inference from perturbation screening data
The Annals of Applied Statistics | 2022-09-05 | Paper |
| Joint inference of repeated evolutionary trajectories and patterns of clonal exclusivity or co-occurrence from tumor mutation trees | 2022-08-30 | Paper |
| Multi-omics subtyping of hepatocellular carcinoma patients using a Bayesian network mixture model | 2021-12-17 | Paper |
Bayesian reconstruction of transmission trees from genetic sequences and uncertain infection times
Statistical Applications in Genetics and Molecular Biology | 2021-05-07 | Paper |
Evolution on distributive lattices
Journal of Theoretical Biology | 2020-09-17 | Paper |
The fractional birth process with power-law immigration
Journal of Statistical Physics | 2020-02-26 | Paper |
netprioR: a probabilistic model for integrative hit prioritisation of genetic screens
Statistical Applications in Genetics and Molecular Biology | 2019-09-12 | Paper |
Mutational interactions define novel cancer subgroups
Nature Communications | 2018-10-19 | Paper |
The geometry of partial fitness orders and an efficient method for detecting genetic interactions
Journal of Mathematical Biology | 2018-09-26 | Paper |
Mutagenetic Tree Models
Algebraic Statistics for Computational Biology | 2017-11-23 | Paper |
Learning monotonic genotype-phenotype maps
Statistical Applications in Genetics and Molecular Biology | 2014-10-07 | Paper |
Covering pairs in directed acyclic graphs
Language and Automata Theory and Applications | 2014-03-31 | Paper |
Covering pairs in directed acyclic graphs
Language and Automata Theory and Applications | 2014-03-31 | Paper |
Evolutionary games with affine fitness functions: applications to cancer
Dynamic Games and Applications | 2012-12-04 | Paper |
The evolution of virulence in RNA viruses under a competition-colonization trade-off
Bulletin of Mathematical Biology | 2011-08-25 | Paper |
Waiting time models of cancer progression
Mathematical Population Studies | 2010-09-21 | Paper |
Markov models for accumulating mutations
Biometrika | 2009-09-29 | Paper |
Markov models for accumulating mutations
Biometrika | 2009-09-29 | Paper |
Epistasis and shapes of fitness landscapes
(available as arXiv preprint) | 2008-03-11 | Paper |
Model Selection for Mixtures of Mutagenetic Trees
Statistical Applications in Genetics and Molecular Biology | 2008-02-18 | Paper |
Model Selection for Mixtures of Mutagenetic Trees
Statistical Applications in Genetics and Molecular Biology | 2008-02-18 | Paper |
Conjunctive Bayesian networks
Bernoulli | 2008-02-06 | Paper |
Conjunctive Bayesian networks
Bernoulli | 2008-02-06 | Paper |
A mutagenetic tree hidden Markov model for longitudinal clonal HIV sequence data
Biostatistics | 2007-04-23 | Paper |
