Cited in
(only showing first 100 items - show all)- Single-index modulated multiple testing
- A hidden spatial-temporal Markov random field model for network-based analysis of time course gene expression data
- HmmSeq: a hidden Markov model for detecting differentially expressed genes from RNA-seq data
- Phogly-PseAAC: prediction of lysine phosphoglycerylation in proteins incorporating with position-specific propensity
- A constrained \(\ell1\) minimization approach for estimating multiple sparse Gaussian or nonparanormal graphical models
- Bayesian hierarchical model for protein identifications
- Gaga: a parsimonious and flexible model for differential expression analysis
- Testing the disjunction hypothesis using Voronoi diagrams with applications to genetics
- Bioconductor
- gaga
- twilight
- edgeR
- SA-cluster
- KEGGgraph
- TWILIGHT
- CNAmet
- EBarrays
- Cytoscape
- casper
- limma
- apcluster
- APCluster
- GOstat
- Onto-Tools
- siggenes
- FatiGO
- GenMAPP
- BioGRID
- clusterRepro
- HmmSeq
- BiNGO
- CLENCH
- GOTM
- GFINDer
- KEGG
- bioNMF
- compdiagTools
- goTools
- cgam
- RGCCA
- ClassComparison
- DOSE
- Galaxy
- GSVA
- recount
- CNVassoc
- iBATCGH
- PennCNV
- IntAct
- FastAnnotator
- MISSEL
- Phogly-PseAAC
- Transcriptator
- SIMULE
- MAPPFinder
- PAGE
- STRING
- TANDEM
- clusterProfiler
- HMDB
- dmGWAS
- HIPPIE
- miRTarBase
- Blast2GO
- ArrayExpress
- DR-Integrator
- EDISA
- ErmineJ
- GANNPhos
- GPS-SNO
- CAMERA
- PCP
- Simfit
- MultiCluster
- MyriMatch
- Mfuzz
- HMM_based_method
- GOrilla
- CpGcluster
- Modeling gene networks in \textit{Saccharomyces cerevisiae} based on gene expression profiles
- A Markov random field-based approach for joint estimation of differentially expressed genes in mouse transcriptome data
- Pomelo II
- GeneNetwork
- SVDMAN
- Babelomics
- PLMLA
- Designing penalty functions in high dimensional problems: the role of tuning parameters
- Analyzing gene expression time-courses based on multi-resolution shape mixture model
- Statistical genomics. Methods and protocols
- Smoothing proximal gradient method for general structured sparse regression
- Kernel generalized canonical correlation analysis
- A Markov random field-based approach to characterizing human brain development using spatial-temporal transcriptome data
- High-performance statistical computing in the computing environments of the 2020s
- Core and specific network markers of carcinogenesis from multiple cancer samples
- Comparability of gene expression in human blood, immune and carcinoma cells
- COXPRESdb
- A Bayesian extension of the hypergeometric test for functional enrichment analysis
- Integrated network analysis to explore the key mRNAs and lncRNAs in acute myocardial infarction
- Alpha influenza virus infiltration prediction using virus-human protein-protein interaction network
- Prognostic factor identification by analysis of the gene expression and DNA methylation data in glioma
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