Cited in
(only showing first 100 items - show all)- Constrained target controllability of complex networks
- A constrained \(\ell1\) minimization approach for estimating multiple sparse Gaussian or nonparanormal graphical models
- Graph centrality based prediction of cancer genes
- Basic networks: definition and applications
- Refining cellular pathway models using an ensemble of heterogeneous data sources
- Synergy of multi-label hierarchical ensembles, data fusion, and cost-sensitive methods for gene functional inference
- Symmetry in complex networks
- Rnamotif
- GEDEVO
- IsoRank
- minet
- TRANSPATH
- Cytoscape
- GO-TermFinder
- CFinder
- SynTReN
- BiNGO
- GFINDer
- KEGG
- TopKLists
- IGLOO
- Reactome
- ARACNE
- DAVID
- HHpred
- PreSPI
- SIRENE
- TRANSFAC
- WebGestalt
- JASPAR
- DIMA
- GOLEM
- Muxviz
- IntAct
- MatInspector
- ClueGO
- ChemSpot
- PANTHER
- Pfam
- SIMULE
- CePa
- CentiServer
- DrugBank
- starBase
- TIGRESS
- STRING
- RegulonDB
- SPIDER2
- SPARQ2L
- TM4
- DisGeNET
- TKPSVD
- HMDB
- ConsensusPathDB
- COMPARTMENTS
- HIPPIE
- IntScore
- iPfam
- miRTarBase
- ArrayExpress
- Phospho.ELM
- COOMA
- MAVisto
- GeneMANIA
- HCGene
- SPINE
- GeneCards
- GraRep
- NodeSketch
- AutoExtend
- persona2vec
- Expression2Kinases
- BioPrompt-box
- cPath
- GOrilla
- Dizzy
- GENIA corpus
- PharmGKB
- QPath
- A graph theoretical approach to data fusion
- InterPreTS
- MCODE
- GE-SpMM
- NetSMF
- SIAS-miner
- PyMDE
- The probability of speciation on an interaction network with unequal substitution rates
- A stochastic model for the development of Bateson-Dobzhansky-Muller incompatibilities that incorporates protein interaction networks
- DIAMOnD
- Analysis of directed networks via the matrix exponential
- Computational challenges in systems biology
- LINE
- Integration of topological measures for eliminating non-specific interactions in protein interaction networks
- Computational cell biology. Methods and protocols
- Symmetric NMTF
- Analysis and identification of toxin targets by topological properties in protein-protein interaction network
- COXPRESdb
- The reduced PC-algorithm: improved causal structure learning in large random networks
- Generating explanations for biomedical queries
- Predicting essential proteins from protein-protein interactions using order statistics
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