Bioinformatics. Volume II: structure, function, and applications
DOI10.1007/978-1-4939-6613-4zbMath1384.92002MaRDI QIDQ1691857
No author found.
Publication date: 25 January 2018
Published in: Methods in Molecular Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1007/978-1-4939-6613-4
clustering; data mining; quantitative trait loci; parameterised algorithms; gene network; drug discovery; metabolic pathway; gene order; 3-D computational modelling of proteins; antibody repertoire; biomarker identification; cancer module identification; cell signalling pathway; computational diagnosis; gene homology; genome-wide association data (GWAS data); genome-wide interaction networks; long non-coding RNAs; optimal features set; paramagnetic NMR data; phylogenetic profile; proteomic dataset
00B15: Collections of articles of miscellaneous specific interest
92C50: Medical applications (general)
92C40: Biochemistry, molecular biology
92D20: Protein sequences, DNA sequences
92-08: Computational methods for problems pertaining to biology
92-02: Research exposition (monographs, survey articles) pertaining to biology
92C42: Systems biology, networks
Uses Software
- R
- Bioconductor
- PLINK
- Rfam
- Rnamotif
- edgeR
- igraph
- MCMCglmm
- MAFFT
- minet
- ViennaRNA
- GenABEL
- TASSEL
- SynTReN
- SCARPA
- UNAFold
- QNet
- KEGG
- OpenNLP
- MENDEL
- BLAT
- Rnaz
- TopHat
- SMART
- ARACNE
- HHpred
- PSI-BLAST
- BioGRID
- FPV
- VANTED
- R/qtl
- Dendroscope
- IntAct
- PANTHER
- lncRNAdb
- CIRCUS
- TreeWiz
- BioMiner
- MetaCrop
- Gravisto
- INDDGO
- WhatsHap
- Numbat
- PARAssign
- Pfam
- COMPASS
- MG-RAST
- Mercator
- MAVID
- LocARNAscan
- Rnall
- RNASurface
- starBase
- CARNA
- GraphClust
- RNACluster
- NoFold
- RNAstrand
- OpenDMAP
- GeneWays
- MedScan
- OSCAR4
- ChemSpot
- LINNAEUS
- GLOGS
- MASTOR
- GCTA
- FFBSKAT
- Postgwas
- RAREMETAL
- icoshift
- ChEMBL
- BindingDB
- PubChem
- pRESTO
- IgRepertoireConstructor
- IgBLAST
- HyPhy
- iHMMune-align
- Ab-origin
- SoDA2
- Decombinator
- IgTree
- QAPgrid
