ViennaRNA

swMATH10504MaRDI QIDQ22464FDOQ22464

Author name not available (Why is that?)

Source code repository: https://github.com/ViennaRNA/ViennaRNA

Described by source

• Expected distance between terminal nucleotides of RNA secondary structures

Cited In (25)

• Improving RNA secondary structure prediction via state inference with deep recurrent neural networks
• Algorithms in Computational Molecular Biology
• Emergence of ribozyme and tRNA-like structures from mineral-rich muddy pools on prebiotic Earth
• On the problem of reconstructing a mixture of \textsc{rna} structures
• An RNA-based theory of natural universal computation
• Euro-Par 2004 Parallel Processing
• Strand design for biomolecular computation.
• RNA secondary structures in a polymer-zeta model how foldings should be shaped for sparsification to establish a linear speedup
• Stochastic Sampling of Structural Contexts Improves the Scalability and Accuracy of RNA 3D Module Identification
• Algebraic dynamic programming for multiple context-free grammars
• RNA bioinformatics
• Title not available (Why is that?)
• Title not available (Why is that?)
• In Vitro Implementation of a Stack Data Structure Based on DNA Strand Displacement
• The rainbow spectrum of RNA secondary structures
• Title not available (Why is that?)
• Efficient Algorithm for Testing Structure Freeness of Finite Set of Biomolecular Sequences
• Bioinformatics. Volume II: structure, function, and applications
• ExpertRNA: A New Framework for RNA Secondary Structure Prediction
• Are RNA networks scale-free?
• RLF-LPI: an ensemble learning framework using sequence information for predicting lncRNA-protein interaction based on AE-ResLSTM and fuzzy decision
• RNA folding kinetics using Monte Carlo and Gillespie algorithms
• Temporal ordering of substitutions in RNA evolution: uncovering the structural evolution of the Human Accelerated Region 1
• Algebraic dynamic programming on trees
• Rule set design problems for oritatami systems

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