ViennaRNA

swMATH10504MaRDI QIDQ22464

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Source code repository: https://github.com/ViennaRNA/ViennaRNA

Described by source

• Expected distance between terminal nucleotides of RNA secondary structures

Related Items (25)

Emergence of ribozyme and tRNA-like structures from mineral-rich muddy pools on prebiotic Earth ⋮ Stochastic Sampling of Structural Contexts Improves the Scalability and Accuracy of RNA 3D Module Identification ⋮ On the problem of reconstructing a mixture of \textsc{rna} structures ⋮ Algebraic dynamic programming for multiple context-free grammars ⋮ Algebraic dynamic programming on trees ⋮ RNA secondary structures in a polymer-zeta model how foldings should be shaped for sparsification to establish a linear speedup ⋮ ExpertRNA: A New Framework for RNA Secondary Structure Prediction ⋮ Euro-Par 2004 Parallel Processing ⋮ Unnamed Item ⋮ The rainbow spectrum of RNA secondary structures ⋮ An RNA-based theory of natural universal computation ⋮ Improving RNA secondary structure prediction via state inference with deep recurrent neural networks ⋮ Bioinformatics. Volume II: structure, function, and applications ⋮ Unnamed Item ⋮ RNA folding kinetics using Monte Carlo and Gillespie algorithms ⋮ Temporal ordering of substitutions in RNA evolution: uncovering the structural evolution of the Human Accelerated Region 1 ⋮ Rule set design problems for oritatami systems ⋮ RNA bioinformatics ⋮ Algorithms in Computational Molecular Biology ⋮ Efficient Algorithm for Testing Structure Freeness of Finite Set of Biomolecular Sequences ⋮ Unnamed Item ⋮ Are RNA networks scale-free? ⋮ In Vitro Implementation of a Stack Data Structure Based on DNA Strand Displacement ⋮ RLF-LPI: an ensemble learning framework using sequence information for predicting lncRNA-protein interaction based on AE-ResLSTM and fuzzy decision ⋮ Strand design for biomolecular computation.

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