swMATH17117MaRDI QIDQ28978FDOQ28978
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Official website: http://contra.stanford.edu/contrafold/
Cited In (72)
- Fast RNA structure alignment for crossing input structures
- Sparse RNA folding: time and space efficient algorithms
- RNA bioinformatics
- Rfam
- onechannelgui
- RNAshapes
- ViennaRNA
- Cofolga
- Mfold
- SCOOP
- MUMMALS
- snoSeeker
- CompaRNA
- Assemble
- CentroidAlign
- CENTROIDFOLD
- ASPIC
- ARB
- COFOLD
- AstexViewer
- ASPicDB
- DAFS
- ASTALAVISTA
- DARNED
- Exogean
- EMIRGE
- ExpEdit
- IPknot
- RNAmute
- Minimus
- PicXAA-R
- PETfold
- PETcofold
- NGS-Trex
- PPfold
- RactIP
- PIntron
- RNAexinv
- RNAfbinv
- RNAalifold
- R-Coffee
- PARalyzer
- PatSearch
- R4RNA
- OligoWalk
- R2R
- RNAG
- OptiRNAi
- RNAspa
- RNASTAR
- RNAstructure
- RILogo
- RNA2D3D
- PolyA_DB
- RNAplex
- REDItools
- RSeQC
- RIPSeeker
- SortMeRNA
- TagCleaner
- WAR
- NNDB
- Pfold
- RNAKinetics
- RSEARCH
- PSoL
- MARNA
- ddbRNA
- Fast RNA Structure Alignment for Crossing Input Structures
- ExpertRNA: A New Framework for RNA Secondary Structure Prediction
- Efficient pattern matching for RNA secondary structures
- Computational methods in noncoding RNA research
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