A graph theoretical approach to data fusion

DOI10.1515/SAGMB-2016-0016MaRDI QIDQ306678zbMATH OpenOpenAlexWikidataFDO

Authors Justina Žurauskienė, Paul D. W. Kirk, Michael P. H. Stumpf

Publication date 1 September 2016

Published in Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Copyright license Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported

Full work available at URL http://pure-oai.bham.ac.uk/ws/files/54755791/Zurauskiene_et_al_A_graph_theoretical_Statistical_Applications_in_Genetics_and_Molecular_Biology_2018.pdf

zbMATH Keywords

clusteringdata integrationfunctional genomicsgraph-theoretic methods

Mathematics Subject Classification ID

Nonparametric estimation (62G05) Applications of statistics to biology and medical sciences; meta analysis (62P10) General biostatistics (92B15)

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Cites work

• \texttt{TopKLists}: a comprehensive \texttt{R} package for statistical inference, stochastic aggregation, and visualization of multiple omics ranked lists
• Bayesian Density Estimation and Inference Using Mixtures
• Bootstrapping cluster analysis: Assessing the reliability of conclusions from microarray experi\-ments.
• Consensus clustering: A resampling-based method for class discovery and visualization of gene expression microarray data
• Gaussian processes for machine learning.
• scientific article; zbMATH DE number 3942813 (Why is no real title available?)
• Improved criteria for clustering based on the posterior similarity matrix
• Nonparametric estimates of standard error: The jackknife, the bootstrap and other methods

Cited in

(5)

• Fusion graphs: merging properties and watersheds
• B-scaling: a novel nonparametric data fusion method
• MDI-GPU: accelerating integrative modelling for genomic-scale data using GP-GPU computing
• Towards Gaussian Bayesian network fusion
• scientific article; zbMATH DE number 2222688 (Why is no real title available?)

Describes a project that uses

Uses Software

• BioGRID
• MCODE
• TopKLists

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