BioGRID
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Cited in
(only showing first 100 items - show all)- Integration of topological measures for eliminating non-specific interactions in protein interaction networks
- LINE
- DIAMOnD
- Refining cellular pathway models using an ensemble of heterogeneous data sources
- Basic networks: definition and applications
- Rnamotif
- Bioinformatics. Volume II: structure, function, and applications
- A constrained \(\ell1\) minimization approach for estimating multiple sparse Gaussian or nonparanormal graphical models
- Gene regulatory networks. Methods and protocols
- Computational cell biology. Methods and protocols
- Computational studies on Alzheimer's disease associated pathways and regulatory patterns using microarray gene expression and network data: revealed association with aging and other diseases
- TRANSPATH
- GEDEVO
- IsoRank
- minet
- Cytoscape
- Observability transition in multiplex networks
- The role of multiplex network structure in cooperation through generalized reciprocity
- Protein complex detection algorithm based on multiple topological characteristics in PPI networks
- GO-TermFinder
- Predicting essential proteins from protein-protein interactions using order statistics
- A survey of computational methods in protein-protein interaction networks
- Applying clique-decomposition for computing Gromov hyperbolicity
- Analysis of directed networks via the matrix exponential
- SynTReN
- CFinder
- A neural network algorithm for semi-supervised node label learning from unbalanced data
- KEGG
- BiNGO
- GFINDer
- TopKLists
- Analysis and identification of toxin targets by topological properties in protein-protein interaction network
- IGLOO
- Reactome
- On the power of simple reductions for the maximum independent set problem
- ARACNE
- TRANSFAC
- HHpred
- DAVID
- Springer Handbook of Bio-/Neuroinformatics
- SIRENE
- PreSPI
- WebGestalt
- Graph centrality based prediction of cancer genes
- JASPAR
- A graph theoretical approach to data fusion
- The probability of speciation on an interaction network with unequal substitution rates
- GOLEM
- Muxviz
- Constrained target controllability of complex networks
- Predicting disease-related genes by path structure and community structure in protein-protein networks
- IntAct
- MatInspector
- ClueGO
- PANTHER
- SIMULE
- Pfam
- starBase
- ChemSpot
- CePa
- TIGRESS
- CentiServer
- DrugBank
- STRING
- SPIDER2
- RegulonDB
- SPARQ2L
- TM4
- DIMA
- TKPSVD
- DisGeNET
- HMDB
- HIPPIE
- SPINE
- IntScore
- ConsensusPathDB
- Phospho.ELM
- iPfam
- miRTarBase
- COMPARTMENTS
- ArrayExpress
- MAVisto
- COOMA
- HCGene
- GeneMANIA
- GeneCards
- Synergy of multi-label hierarchical ensembles, data fusion, and cost-sensitive methods for gene functional inference
- GraRep
- NodeSketch
- A stochastic model for the development of Bateson-Dobzhansky-Muller incompatibilities that incorporates protein interaction networks
- persona2vec
- AutoExtend
- Computational challenges in systems biology
- Generating explanations for biomedical queries
- Expression2Kinases
- GOrilla
- PharmGKB
- BioPrompt-box
- cPath
- QPath
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