Springer Handbook of Bio-/Neuroinformatics

DOI10.1007/978-3-642-30574-0MaRDI QIDQ2925491zbMATH OpenOpenAlexFDO

Authors

Publication date 16 October 2014

Published in Springer Handbooks (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-642-30574-0

zbMATH Keywords

neural circuit modelsprotein foldingprotein characterizationphylogenetic cladogrampersonalized medicinepattern formationnutrigenomicsneuropathological oscillationsneurogenetic modelsprotein modelingneocognitronnatural languagenanomedicinemultiscale time-frequency analysismultiple spike trainsmolecular networksmicroRNAmicroarrayprotein separationprotein-protein interaction networkproteomicsquantum computingrecurrence plotsrobust recognitionrule-based methodsself-organizing mapssignal processingspiking neural networkssupervised learningsupport vector machinessynaptic transmissiontranscriptomic data analysisunsupervised learningchromatinAlzheimer's diseaseanimal morphogenesisarray modelingautoimmune diseasebacterial diffusionbinding motifbiological databasesbiological networksbrain atlasbrain oscillationsbrain-computer interfacebrain-like information processingbrain-like roboticscancer stem cell formationcentral dogma of molecular biologyaggregate modelingchromosome conformation capturecis-regulatory elementsconnectivity studiesdielectrophoresisdiscriminant pathwaysenrichment analysisepigeneticsexome sequencing datafuzzy logicgene-dependent dynamicshigh throughput gene expressioninformation sciencekernel methodskernel spacesmagnetic resonance imaging

Mathematics Subject Classification ID

Collections of articles of miscellaneous specific interest (00B15) Learning and adaptive systems in artificial intelligence (68T05) General reference works (handbooks, dictionaries, bibliographies, etc.) pertaining to biology (92-00) Proceedings, conferences, collections, etc. pertaining to biology (92-06) Neural networks for/in biological studies, artificial life and related topics (92B20) Biological rhythms and synchronization (92B25) Neural biology (92C20) Biochemistry, molecular biology (92C40) Medical applications (general) (92C50) Genetics and epigenetics (92D10) Problems related to evolution (92D15) Protein sequences, DNA sequences (92D20)

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Cited in

(3)

• Isogeometric shape optimization for nonlinear ultrasound focusing
• Knowledge extraction from deep convolutional neural networks applied to cyclo-stationary time-series classification
• The Jordan-Moore-Gibson-Thompson equation: well-posedness with quadratic gradient nonlinearity and singular limit for vanishing relaxation time

Describes a project that uses

Uses Software

• minet
• BiNGO
• KEGG
• iPARTS
• CFinder
• SimpleMKL
• COPASI
• Sylamer
• Spikenet
• R
• Biopython
• WEKA
• LIBSVM
• Rnamotif
• Rfam
• NEURON
• miRBase
• UniProt
• Affymetrix
• GPTIPS
• MEME
• PROCHECK
• FUGUE
• Infernal
• ARACNE
• TRANSFAC
• Bio-SPICE
• BiGG
• BacSim
• My5C
• WebLogo
• STAMP
• CMfinder
• HotKnots
• MacRad
• MaSTerClass
• eXiT*CBR
• iMembrane
• MEDELLER
• QMEAN
• LOOPER
• ArchPRED
• jCOLIBRI
• SWISS-MODEL
• ANNOVAR
• HHpred
• PHAT
• TurboFold
• ProbKnot
• CODA
• RepeatMasker
• Genomatix
• SIRENE
• GAME
• BioOptimizer
• BioGRID
• nocoRNAc
• PreSPI
• UniHI
• Bambino
• GAMES
• GeoSVM
• Protege
• KDDONTO
• WebGestalt

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