Rfam
From MaRDI portal
Cited in
(only showing first 100 items - show all)- On pseudoknot-bordered words and their properties
- Fast embedding methods for clustering tens of thousands of sequences
- DARN!
- Elkhound
- Regexpcount
- Palingol
- Rnabob
- Rnamotif
- Bioinformatics. Volume II: structure, function, and applications
- Modeling dynamic programming problems over sequences and trees with inverse coupled rewrite systems
- Integrating Pareto optimization into dynamic programming
- RNA folding kinetics using Monte Carlo and Gillespie algorithms
- ALLPATHS
- KiCS2
- RNAshapes
- onechannelgui
- tRNAscan-SE
- minet
- Spikenet
- GenRGenS
- A possible circular RNA at the origin of life
- ViennaRNA
- RNAfold
- RNAsubopt
- RNA bioinformatics
- Interval-based distance function for identifying RNA structure candidates
- Analyzing ambiguity of context-free grammars
- EMBOSS
- Sylamer
- Optimal string clustering based on a Laplace-like mixture and EM algorithm on a set of strings
- FFTbor2D
- Mfold
- Cofolga
- ARTS
- DIAL
- iPARTS
- miRBase
- Affymetrix
- snoSeeker
- RNAforester
- VARNA
- CompaRNA
- BLAT
- Infernal
- RNAmute
- PartTree
- RNAexinv
- RNAfbinv
- RNAalifold
- CONTRAfold
- Rnaz
- CentroidAlign
- RactIP
- COFOLD
- PicXAA-R
- CENTROIDFOLD
- IPknot
- DAFS
- PETfold
- PETcofold
- PPfold
- RNAG
- R-Coffee
- RNAspa
- RNASTAR
- RNAstructure
- PseudoViewer3
- jViz.Rna
- Assemble
- R4RNA
- RILogo
- R2R
- RNA2D3D
- RNAplex
- RSeQC
- ASPIC
- PIntron
- Exogean
- REDItools
- NGS-Trex
- SortMeRNA
- ARB
- TagCleaner
- EMIRGE
- Minimus
- FragGeneScan
- RIPSeeker
- PARalyzer
- DARNED
- ExpEdit
- PatSearch
- WAR
- SCOOP
- AstexViewer
- BioMart
- ASPicDB
- PolyA_DB
- SPEPlip
- ASTALAVISTA
- OptiRNAi
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