Mfold
From MaRDI portal
Cited in
(only showing first 100 items - show all)- Sparse RNA folding: time and space efficient algorithms
- Nondeterministic seedless oritatami systems and hardness of testing their equivalence
- Cofolga: a genetic algorithm for finding the common folding of two RNAs
- Possible multiple origins of replication in primate mitochondria: alternative role of tRNA sequences
- Parametric analysis of RNA branching configurations
- Dynamic extended folding: modeling the RNA secondary structures during co-transcriptional folding
- A fuzzy model of predicting RNA secondary structure
- Combinatorics of locally optimal RNA secondary structures
- RNA secondary structures in a polymer-zeta model how foldings should be shaped for sparsification to establish a linear speedup
- Symmetric time warping, Boltzmann pair probabilities and functional genomics
- On topological indices for small RNA graphs
- Detecting conserved secondary structures in RNA molecules using constrained structural alignment
- In silico analysis of EST and genomic sequences allowed the prediction of cis-regulatory elements for Entamoeba histolytica mRNA polyadenylation
- Computational identification of novel microRNA homologs in the chimpanzee genome
- Computational identification of 48 potato microRNAs and their targets
- A grammatical approach to RNA-RNA interaction prediction
- On the structure of RNA branching polytopes
- RNA bioinformatics
- Computational identification of microRNAs and their targets
- Rfam
- onechannelgui
- RNAshapes
- tRNAscan-SE
- GenRGenS
- RNAsoft
- RNAfold
- RNAsubopt
- ViennaRNA
- Cofolga
- SCOOP
- UNAFold
- ARTS
- miRBase
- snoSeeker
- CompaRNA
- VARNA
- Assemble
- CentroidAlign
- CENTROIDFOLD
- ASPIC
- ARB
- COFOLD
- CONTRAfold
- AstexViewer
- ASPicDB
- DAFS
- ASTALAVISTA
- DARNED
- Oases
- Exogean
- EMIRGE
- ExpEdit
- IPknot
- jViz.Rna
- RNAmute
- ModeRNA
- Minimus
- PicXAA-R
- PETfold
- PETcofold
- NGS-Trex
- PPfold
- RactIP
- PIntron
- RNAexinv
- RNAfbinv
- RNAalifold
- R-Coffee
- PARalyzer
- PatSearch
- R4RNA
- OligoWalk
- R2R
- RNAG
- OptiRNAi
- RNAspa
- RNASTAR
- RILogo
- RNA2D3D
- PolyA_DB
- RNAplex
- REDItools
- RSeQC
- SeqMap
- RIPSeeker
- ProbKnot
- SortMeRNA
- TagCleaner
- SPEPlip
- WAR
- CONCORD
- NNDB
- Pfold
- RDMAS
- RNAKinetics
- RSEARCH
- Sfold
- VF2++
- uShuffle
- iHOP
This page was built for software: Mfold
