DAVID
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(only showing first 100 items - show all)- Analyzing gene expression time-courses based on multi-resolution shape mixture model
- Characterization of BioPlex network by topological properties
- Several indicators of critical transitions for complex diseases based on stochastic analysis
- HmmSeq: a hidden Markov model for detecting differentially expressed genes from RNA-seq data
- A mixed integer programming-based global optimization framework for analyzing gene expression data
- Phogly-PseAAC: prediction of lysine phosphoglycerylation in proteins incorporating with position-specific propensity
- Gaga: a parsimonious and flexible model for differential expression analysis
- Core and specific network markers of carcinogenesis from multiple cancer samples
- Smoothing proximal gradient method for general structured sparse regression
- COXPRESdb
- A Markov random field-based approach to characterizing human brain development using spatial-temporal transcriptome data
- Bioinformatic analysis revealing association of exosomal mRNAs and proteins in epigenetic inheritance
- Kernel generalized canonical correlation analysis
- Multi-objective optimization for clustering 3-way gene expression data
- A hidden spatial-temporal Markov random field model for network-based analysis of time course gene expression data
- A Bayesian extension of the hypergeometric test for functional enrichment analysis
- Gene expression and protein-protein interaction data for identification of colon cancer related genes using \(f\)-information measures
- A constrained \(\ell1\) minimization approach for estimating multiple sparse Gaussian or nonparanormal graphical models
- Pairwise directions estimation for multivariate response regression data
- High-performance statistical computing in the computing environments of the 2020s
- Prediction and functional analysis of prokaryote lysine acetylation site by incorporating six types of features into Chou's general PseAAC
- Testing the disjunction hypothesis using Voronoi diagrams with applications to genetics
- Composite large margin classifiers with latent subclasses for heterogeneous biomedical data
- Scalable module detection for attributed networks with applications to breast cancer
- Network-based feature screening with applications to genome data
- A new centrality measure of nodes in multilayer networks under the framework of tensor computation
- A graph spectrum based geometric biclustering algorithm
- Statistical methods for the analysis of high-throughput data based on functional profiles derived from the Gene Ontology
- Biological pathway selection through Bayesian integrative modeling
- A graphical model method for integrating multiple sources of genome-scale data
- iBATCGH: integrative Bayesian analysis of transcriptomic and CGH data
- Statistical genomics. Methods and protocols
- An improved graph Laplacian regularization method for identifying biomarkers of Alzheimer's disease
- Modeling gene networks in \textit{Saccharomyces cerevisiae} based on gene expression profiles
- A Markov random field-based approach for joint estimation of differentially expressed genes in mouse transcriptome data
- Designing penalty functions in high dimensional problems: the role of tuning parameters
- Meta-analysis of microarray data: the case of imatinib resistance in chronic myelogenous leukemia
- Multiscale co-clustering for tensor data based on canonical polyadic decomposition and slice-wise factorization
- Alpha influenza virus infiltration prediction using virus-human protein-protein interaction network
- Prognostic factor identification by analysis of the gene expression and DNA methylation data in glioma
- Single-index modulated multiple testing
- Bayesian hierarchical model for protein identifications
- Bioconductor
- gaga
- twilight
- edgeR
- SA-cluster
- KEGGgraph
- TWILIGHT
- CNAmet
- EBarrays
- Cytoscape
- casper
- limma
- apcluster
- APCluster
- GOstat
- Onto-Tools
- siggenes
- FatiGO
- GenMAPP
- BioGRID
- clusterRepro
- HmmSeq
- BiNGO
- CLENCH
- GOTM
- GFINDer
- KEGG
- bioNMF
- compdiagTools
- goTools
- cgam
- RGCCA
- ClassComparison
- DOSE
- Galaxy
- GSVA
- recount
- Algebraic and topological indices of molecular pathway networks in human cancers
- CNVassoc
- iBATCGH
- PennCNV
- IntAct
- FastAnnotator
- MISSEL
- Phogly-PseAAC
- Transcriptator
- SIMULE
- MAPPFinder
- PAGE
- STRING
- TANDEM
- clusterProfiler
- HMDB
- dmGWAS
- HIPPIE
- miRTarBase
- Blast2GO
- ArrayExpress
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