A graph spectrum based geometric biclustering algorithm

DOI10.1016/J.JTBI.2012.10.012MaRDI QIDQ2013269zbMATH OpenOpenAlexWikidataFDO

Authors Doris Z. Wang, Hong Yan

Publication date 17 August 2017

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2012.10.012

zbMATH Keywords

Hough transformgraph spectramicroarray data analysisgeometric biclustering

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Applications of graph theory (05C90) General biostatistics (92B15)

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Cites work

• scientific article; zbMATH DE number 3717357 (Why is no real title available?)
• scientific article; zbMATH DE number 47926 (Why is no real title available?)
• scientific article; zbMATH DE number 1750182 (Why is no real title available?)
• 10.1162/153244303322753661
• A new geometric biclustering algorithm based on the Hough transform for analysis of large-scale microarray data
• Extracting conserved gene expression motifs from gene expression data
• PQN and DQN: algorithms for expression microarrays
• The disposition of the LZCC protein residues in wenxiang diagram provides new insights into the protein-protein interaction mechanism
• Tumor classification using phylogenetic methods on expression data

Cited in

(2)

• A probabilistic relaxation labeling framework for reducing the noise effect in geometric biclustering of gene expression data
• A new geometric biclustering algorithm based on the Hough transform for analysis of large-scale microarray data

Describes a project that uses

Uses Software

• FABIA
• DAVID
• Wenxiang
• bioNMF

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