Analysis and identification of toxin targets by topological properties in protein-protein interaction network

DOI10.1016/j.jtbi.2014.02.001zbMath1412.92112OpenAlexW2047277669WikidataQ51113794 ScholiaQ51113794MaRDI QIDQ2632760

Yanyan Li

Publication date: 15 May 2019

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2014.02.001

zbMATH Keywords

support vector machinestatistical testtopological featuressequence information

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Systems biology, networks (92C42)

Related Items

Human proteins characterization with subcellular localizations

Uses Software

• LIBSVM
• Cd-hit
• BioGRID
• IntAct
• SVM-Prot

Cites Work

• Predict potential drug targets from the ion channel proteins based on SVM
• The modified Mahalanobis discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition
• Pseudo amino acid composition and multi-class support vector machines approach for conotoxin superfamily classification
• Prediction of apoptosis protein subcellular location using improved hybrid approach and pseudo-amino acid composition
• Predicting ion channels and their types by the dipeptide mode of pseudo amino acid composition
• Collective dynamics of ‘small-world’ networks
• Assessing experimentally derived interactions in a small world