An optimization modelling for string selection in molecular biology using Pareto optimality

DOI10.1016/J.APM.2011.02.010zbMath1221.90089OpenAlexW2005386311MaRDI QIDQ639159

Majid Soleimani-damaneh

Publication date: 18 September 2011

Published in: Applied Mathematical Modelling (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.apm.2011.02.010

zbMATH Keywords

optimizationmolecular biologyclosest string problem (CSP)OR in biology

Mathematics Subject Classification ID

Applications of mathematical programming (90C90) Multi-objective and goal programming (90C29) Biochemistry, molecular biology (92C40)

Related Items (11)

Inverse DEA under inter-temporal dependence using multiple-objective programming ⋮ Vector Optimization Problems and Generalized Vector Variational-Like Inequalities ⋮ A revised Pascoletti-Serafini scalarization method for multiobjective optimization problems ⋮ Integral Global Optimality Conditions and an Algorithm for Multiobjective Problems ⋮ Infinite alternative theorems and nonsmooth constraint qualification conditions ⋮ Slack-based generalized Tchebycheff norm scalarization approaches for solving multiobjective optimization problems ⋮ Multiobjective program with support functions under \((G,C,\rho)\)-convexity assumptions ⋮ Improved optimization modelling for the closest string and related problems ⋮ On the Fritz John saddle point problem for differentiable multiobjective optimization ⋮ Scalarization for characterization of approximate strong/weak/proper efficiency in multi-objective optimization ⋮ Nonmonotone trust region algorithm for solving the unconstrained multiobjective optimization problems

Cites Work

• Unnamed Item
• On covering problems of codes
• A dual-based algorithm for solving lexicographic multiple objective programs
• Global optimization in biology and medicine
• Distinguishing string selection problems.
• An application of nonlinear optimization in molecular biology
• A parallel multistart algorithm for the closest string problem
• On some optimization problems in molecular biology
• Finding similar regions in many strings
• Opportunities for Combinatorial Optimization in Computational Biology
• Optimal Solutions for the Closest-String Problem via Integer Programming
• Multicriteria Optimization

This page was built for publication: An optimization modelling for string selection in molecular biology using Pareto optimality