Moment closure based parameter inference of stochastic kinetic models

DOI10.1007/S11222-011-9310-8zbMath1322.65034OpenAlexW2088020133WikidataQ59859636 ScholiaQ59859636MaRDI QIDQ746274

Colin S. Gillespie, Darren J. Wilkinson, Peter Milner

Publication date: 16 October 2015

Published in: Statistics and Computing (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s11222-011-9310-8

zbMATH Keywords

moment closurepartial observationsstochastic kinetic modelbridge updatingrate parameters

Mathematics Subject Classification ID

Point estimation (62F10)

Related Items (8)

General solution of the chemical master equation and modality of marginal distributions for hierarchic first-order reaction networks ⋮ Method of conditional moments (MCM) for the chemical master equation ⋮ Bayesian computation methods for inference in stochastic kinetic models ⋮ Approximation and inference methods for stochastic biochemical kinetics—a tutorial review ⋮ Diagnostics for assessing the linear noise and moment closure approximations ⋮ Inverse Gillespie for inferring stochastic reaction mechanisms from intermittent samples ⋮ A population Monte Carlo scheme with transformed weights and its application to stochastic kinetic models ⋮ Analysis of Markov jump processes under terminal constraints

Uses Software

• MCSim

Cites Work

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• Novel moment closure approximations in stochastic epidemics
• Moment closure approximations for stochastic kinetic models with rational rate laws
• Bayesian inference for nonlinear multivariate diffusion models observed with error
• Novel bivariate moment-closure approximations
• Bayesian Inference for Stochastic Kinetic Models Using a Diffusion Approximation

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