Approximate Bayesian inference for hierarchical Gaussian Markov random field models

DOI10.1016/J.JSPI.2006.07.016zbMath1114.62025OpenAlexW2149174640MaRDI QIDQ148994

Håvard Rue, Sara Martino, Håvard Rue, Sara Martino

Publication date: October 2007

Published in: Journal of Statistical Planning and Inference (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jspi.2006.07.016

zbMATH Keywords

approximate Bayesian inferenceGaussian Markov random fieldsCholesky triangleconditional auto-regressionsdisease mappingshierarchical GMRF-modelsinsulin-dependent diabetes mellitusLaplace-approximationmarginal variances for GMRFsnumerical methods for sparse matricesoral cavity cancer mortalitysemi-parametric ecological regression

Mathematics Subject Classification ID

Random fields; image analysis (62M40) Multivariate analysis (62H99) Applications of statistics to biology and medical sciences; meta analysis (62P10) Bayesian inference (62F15) Monte Carlo methods (65C05) Numerical analysis or methods applied to Markov chains (65C40)

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Uses Software

• GMRFLib

Cites Work

• Unnamed Item
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• Fast Sampling of Gaussian Markov Random Fields
• Bayesian image restoration, with two applications in spatial statistics (with discussion)
• On the Second‐Order Random Walk Model for Irregular Locations
• Accurate Approximations for Posterior Moments and Marginal Densities
• On computing certain elements of the inverse of a sparse matrix
• Model-Based Geostatistics
• Log Gaussian Cox Processes
• Fitting Gaussian Markov Random Fields to Gaussian Fields
• On Block Updating in Markov Random Field Models for Disease Mapping
• Bayesian Detection of Clusters and Discontinuities in Disease Maps
• Approximating Hidden Gaussian Markov Random Fields
• Gaussian Markov Random Fields
• Efficient parametrisations for normal linear mixed models
• Non‐Parametric Ecological Regression and Spatial Variation

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