Classification of gene functions using support vector machine for time-course gene expression data

DOI10.1016/J.CSDA.2007.09.002zbMath1452.62839OpenAlexW2005089485MaRDI QIDQ1023587

Sujong Kim, Ja-Yong Koo, Changyi Park, Insuk Sohn, Jae Won Lee

Publication date: 12 June 2009

Published in: Computational Statistics and Data Analysis (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.csda.2007.09.002

zbMATH Keywords

B-spline basisFourier basisfunctional data classificationgene function

Mathematics Subject Classification ID

Computational methods for problems pertaining to statistics (62-08) Functional data analysis (62R10) Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10)

Related Items (12)

Polarization of forecast densities: a new approach to time series classification ⋮ A hypothesis test using bias-adjusted AR estimators for classifying time series in small samples ⋮ Efficient classification for longitudinal data ⋮ Functional data classification using covariate-adjusted subspace projection ⋮ Editorial: Computational statistics within clinical research ⋮ Supervised classification using probabilistic decision graphs ⋮ Adaptive clustering for time series: application for identifying cell cycle expressed genes ⋮ Editorial: Statistical genetics \& statistical genomics: where biology, epistemology, statistics, and computation collide ⋮ Informative transcription factor selection using support vector machine-based generalized approximate cross validation criteria ⋮ Selecting marker genes for cancer classification using supervised weighted kernel clustering and the support vector machine ⋮ Transfer learning for functional mean estimation: phase transition and adaptive algorithms ⋮ Functional logistic regression with fused lasso penalty

Uses Software

• fda (R)

Cites Work

• Unnamed Item
• Performing hypothesis tests on the shape of functional data
• Functional data analysis
• Clustering functional data
• Support-vector networks
• Functional Classification in Hilbert Spaces
• Comparing the shapes of regression functions

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