Informative transcription factor selection using support vector machine-based generalized approximate cross validation criteria

DOI10.1016/J.CSDA.2008.05.001MaRDI QIDQ961341zbMATH OpenOpenAlexFDO

Authors Insuk Sohn, Jooyong Shim, Changha Hwang, Sujong Kim, Jae Won Lee

Publication date 30 March 2010

Published in Computational Statistics and Data Analysis (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.csda.2008.05.001

Mathematics Subject Classification ID

Computational methods for problems pertaining to statistics (62-08) Classification and discrimination; cluster analysis (statistical aspects) (62H30) Learning and adaptive systems in artificial intelligence (68T05)

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Cites work

• scientific article; zbMATH DE number 1332320 (Why is no real title available?)
• scientific article; zbMATH DE number 823069 (Why is no real title available?)
• 10.1162/153244303322753706
• Classification of gene functions using support vector machine for time-course gene expression data
• Gene selection for cancer classification using support vector machines
• Structured multicategory support vector machines with analysis of variance decomposition

Cited in

(6)

• Prediction of key transcription factors during skin regeneration by combining gene expression data and regulatory network information analysis
• Editorial: Statistical genetics \& statistical genomics: where biology, epistemology, statistics, and computation collide
• A mathematical model in the study of genes for identifying transcription factor binding sites
• Identifying transcription factor targets using enhanced Bayesian classifier
• Transcription factor-binding site identification and gene classification via fusion of the supervised-weighted discrete kernel clustering and support vector machine
• Application of biostatistics and bioinformatics tools to identify putative transcription factor-gene regulatory network of ankylosing spondylitis and sarcoidosis

Describes a project that uses

Uses Software

• LogicReg
• ElemStatLearn

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