Solving chemical master equations by adaptive wavelet compression (Q983027)
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| Language | Label | Description | Also known as |
|---|---|---|---|
| English | Solving chemical master equations by adaptive wavelet compression |
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Solving chemical master equations by adaptive wavelet compression (English)
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28 July 2010
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After the introduction of the chemical master equation (CME) the approximation of the solution of the CME by means of wavelets is discussed. The solution is represented in a sparse wavelet basis which is adapted in each time step. At first, a wavelet method which is only adaptive in space is considered. Hereby, a 2-stage Gauss-Runge-Kutta method and higher order Daubechies wavelets are used. Then, a strategy for choosing the step-size in time adaptively is proposed. Four numerical examples are presented to demonstrate the performance of the adaptive wavelet method.
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chemical master equation
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wavelet compression
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adaptive step-size selection
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adaptive Galerkin approximation
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Rothe's method
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stochastic reaction kinetics
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gene regulatory networks
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step-size control
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Gauss-Runge-Kutta method
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numerical examples
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