Robert Brijder

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List of research outcomes

PublicationDate of PublicationType
Computing with chemical reaction networks: a tutorial2024-02-09Paper
Democratic, existential, and consensus-based output conventions in stable computation by chemical reaction networks2023-11-30Paper
DNAQL: a query language for DNA sticker complexes2023-09-08Paper
The interlace polynomial and the Tutte–Martin polynomial2023-04-28Paper
A characterization of circle graphs in terms of total unimodularity2022-04-07Paper
On matrices and \(K\)-relations2022-02-14Paper
On matrices and \(K\)-relations2020-10-26Paper
Counterexamples to a conjecture of Las Vergnas2020-09-15Paper
On the Expressive Power of Query Languages for Matrices2020-08-06Paper
A characterization of circle graphs in terms of multimatroid representations2020-01-27Paper
Minimal output unstable configurations in chemical reaction networks and deciders2019-07-10Paper
Dominance and deficiency for Petri nets and chemical reaction networks2019-07-10Paper
Graphs Associated With DNA Rearrangements and Their Polynomials2019-03-11Paper
Characterizing $(0,\pm 1)$-matrices with only even-rank principal submatrices in terms of skew-symmetry2018-11-12Paper
Conditions for extinction events in chemical reaction networks with discrete state spaces2018-04-11Paper
Orienting transversals and transition polynomials of multimatroids2018-01-11Paper
Sorting by reversals and the theory of 4-regular graphs2017-12-06Paper
Isotropic matroids. III: Connectivity2017-07-13Paper
Isotropic matroids. I: Multimatroids and neighborhoods2016-12-06Paper
Isotropic matroids. II: Circle graphs2016-12-06Paper
Robustness of Expressivity in Chemical Reaction Networks2016-11-30Paper
Graph-theoretic formalization of hybridization in DNA sticker complexes2016-03-10Paper
Recombination faults in gene assembly in ciliates modeled using multimatroids2015-12-10Paper
Dominance and T-Invariants for Petri Nets and Chemical Reaction Networks2015-09-30Paper
Graph Polynomials Motivated by Gene Rearrangements in Ciliates2015-02-25Paper
Output Stability and Semilinear Sets in Chemical Reaction Networks and Deciders2014-10-08Paper
Interlace polynomials for multimatroids and delta-matroids2014-08-28Paper
The adjacency matroid of a graph2014-08-14Paper
The Algebra of Gene Assembly in Ciliates2014-06-23Paper
The nullity theorem for principal pivot transform2014-02-19Paper
Membrane Systems with Marked Membranes2013-12-06Paper
On the inference of non-confluent NLC graph grammars2013-08-27Paper
Nullity and Loop Complementation for Delta-Matroids2013-06-27Paper
Quaternary matroids are vf-safe2013-02-18Paper
A Type System for DNAQL2012-11-06Paper
Quaternary Bicycle Matroids and the Penrose Polynomial for Delta-Matroids2012-10-29Paper
Pivots, determinants, and perfect matchings of graphs2012-10-11Paper
A TOUR OF REACTION SYSTEMS2012-08-29Paper
https://portal.mardi4nfdi.de/entity/Q28932952012-06-20Paper
Representing Reaction Systems by Trees2012-06-15Paper
A comparison of graph-theoretic DNA hybridization models2012-05-30Paper
The group structure of pivot and loop complementation on graphs and set systems2011-11-29Paper
Graph-Theoretic Formalization of Hybridization in DNA Sticker Complexes2011-09-16Paper
Reaction Systems with Duration2011-06-24Paper
Characterizing Compressibility of Disjoint Subgraphs with NLC Grammars2011-06-03Paper
On aggregation in multiset-based self-assembly of graphs2011-05-23Paper
Nullity invariance for pivot and the interlace polynomial2011-04-11Paper
Maximal pivots on graphs with an application to gene assembly2010-11-25Paper
Pivot and Loop Complementation on Graphs and Set Systems2010-06-17Paper
Combining overlap and containment for gene assembly in ciliates2010-02-19Paper
Extended strings and graphs for simple gene assembly2010-02-09Paper
REDUCTION GRAPHS FROM OVERLAP GRAPHS FOR GENE ASSEMBLY IN CILIATES2009-06-23Paper
Perfectly quilted rectangular snake tilings2009-04-16Paper
Extending the Overlap Graph for Gene Assembly in Ciliates2008-11-20Paper
Membrane systems with proteins embedded in membranes2008-11-06Paper
Strategies of loop recombination in ciliates2008-09-10Paper
The fibers and range of reduction graphs in ciliates2008-08-19Paper
https://portal.mardi4nfdi.de/entity/Q35051202008-06-18Paper
From Micro to Macro: How the Overlap Graph Determines the Reduction Graph in Ciliates2008-02-26Paper
A String-Based Model for Simple Gene Assembly2008-02-26Paper
Characterizing Reduction Graphs for Gene Assembly in Ciliates2007-11-28Paper
Membrane Systems with External Control2007-09-03Paper
Cycles and communicating classes in membrane systems and molecular dynamics2007-03-27Paper
https://portal.mardi4nfdi.de/entity/Q34255712007-02-26Paper
Reducibility of gene patterns in ciliates using the breakpoint graph.2006-05-18Paper
COMPLEXITY OF BIO-COMPUTATION: SYMBOLIC DYNAMICS IN MEMBRANE SYSTEMS2006-04-06Paper

Research outcomes over time


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