AMBER
From MaRDI portal
AMBER Q14073
Cited in
(only showing first 100 items - show all)- The adaptive MSINR algorithm to improve error rate for channel equalization
- Free energy analysis of protein-DNA binding: The EcoRI endonuclease-DNA complex
- GPAMM
- IMD
- GAMESS
- NAMD
- TINKER
- Gromacs
- WebMO
- Fractional Poisson-Nernst-Planck model for ion channels. I: Basic formulations and algorithms
- The Java environment for nature-inspired approaches (JENA): a workbench for biocomputing and biomodelling enthusiasts
- LAMMPS
- CHARMM
- PLUMED
- CPMD
- DESMOND
- AdResS
- DesParO
- MIBPB
- MorphoJ
- Modern methods and software systems of molecular modeling and application of behavior algebra
- DL_POLY
- DL_POLY_3
- NAMD2
- An improved thermal model for SPH metal cutting simulations on GPU
- BALL
- Qmd-plot
- Principal nested shape space analysis of molecular dynamics data
- BioSPI
- Nonlinear multiscale modeling of polymer materials
- Molecular dynamics simulations study of influence of Tyr422Ala mutation on transcriptional enhancer activation domain 4 (TEAD4) and transcription co-activators complexes
- Multiresolution molecular mechanics: adaptive analysis
- A GPU-based large-scale Monte Carlo simulation method for systems with long-range interactions
- Virtual model validation of complex multiscale systems: applications to nonlinear elastostatics
- SAMG
- Predicting the efficiency of UAG translational stop signal through studies of physicochemical properties of its composite mono- and dinucleotides
- A model for short -neurotoxin bound to nicotinic acetylcholine receptor from Torpedo californica: Comparison with long-chain -neurotoxins and -conotoxins
- PDB2PQR
- Time-dependent density functional theory
- PAST
- shapes
- CP2K
- Adaptive thermostats for noisy gradient systems
- Structural and energetic comparison of the complexes of aminoglycosides with the model of the ribosomal A-site
- VARNA
- MINT
- Statistical shape analysis. With applications in R
- Quantum dynamics in continuum for proton transport. II: Variational solvent-solute interface
- Efficient communication and collection with compact normal forms
- MYNTS
- PuReMD
- HOOMD-blue
- VMD
- GROW
- LAMA
- RUMD
- OpenMM
- The value of knowing that you do not know
- TREMOLO-X
- WHAM
- DynamO
- Osprey
- DelEnsembleElec
- ACEMD
- GPAMM-software package for molecular dynamics on graphical processing units
- AutoNester
- ModelCompare
- PackAssistant
- ProMiner
- LC-GAP
- ChemoCR
- Simit
- ms2
- Massively parallel Monte Carlo for many-particle simulations on GPUs
- An improved fast multipole method for electrostatic potential calculations in a class of coarse-grained molecular simulations
- Investigating protein-protein and protein-ligand interactions by molecular dynamics simula\-tions
- Quantum Mechanics/Classical Mechanics Modeling of Biological Systems
- geomorph
- Accelerating Molecular Dynamics Simulations on PlayStation 3 Platform Using Virtual-GRAPE Programming Model
- MetaPlab
- JENA
- RASPA
- MDSimAid
- Spectral accuracy in fast Ewald-based methods for particle simulations
- scientific article; zbMATH DE number 1250624 (Why is no real title available?)
- Visualising business processes
- ORCA
- Parallel molecular dynamics with irregular domain decomposition
- DelEnsembleElec: computing ensemble-averaged electrostatics using DelPhi
- Classical investigation of long-range coherence in biological systems
- A GPU-accelerated direct-sum boundary integral Poisson-Boltzmann solver
- Force Field Modelling of Conformational Energies
- SCOWLP
- The General Utility Lattice Program (<scp>GULP</scp>)
- scientific article; zbMATH DE number 2090682 (Why is no real title available?)
- Scientific computing and algorithms in industrial simulations. Projects and products of Fraunhofer SCAI
- Liouville-type equations for the n-particle distribution functions of an open system
- DL_MONTE
- Approximate Counting with Deterministic Guarantees for Affinity Computation
- dlmontepython
This page was built for software: AMBER
