A New Approach to Protein Identification

DOI10.1007/11732990_31MaRDI QIDQ3596258zbMATH OpenOpenAlexFDO

Authors Nuno Bandeira, Dekel Tsur, Ari Frank, Pavel Pevzner

Publication date 30 August 2007

Published in Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/11732990_31

zbMATH Keywords

post-translationally modified peptidesprotein identificationtandem mass-spectrometry

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40)

Recommendations

• Research in Computational Molecular Biology
• A robust algorithm for identification of proteins in a database
• Implementation and Application of Automata
• Non-metric similarity search of tandem mass spectra including posttranslational modifications
• AN AUTOMATA APPROACH TO MATCH GAPPED SEQUENCE TAGS AGAINST PROTEIN DATABASE

Cited in

(12)

• A robust algorithm for identification of proteins in a database
• A likelihood-based scoring method for peptide identification using mass spectrometry
• A fast algorithm and software for analysis of FT-ICR data
• A new criterion and method for amino acid classification
• Indexing and searching a mass spectrometry database
• Protein identification problem from a Bayesian point of view
• Non-metric similarity search of tandem mass spectra including posttranslational modifications
• Towards mechanistic prediction of mass spectra using graph transformation
• Assessing the significance of peptide spectrum match scores
• Efficient interpretation of tandem mass tags in top-down proteomics
• Implementation and Application of Automata
• Research in Computational Molecular Biology

This page was built for publication: A New Approach to Protein Identification

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q3596258)