Algorithms to Study Large Metabolic Network Dynamics

DOI10.1051/MMNP/201510507MaRDI QIDQ3454616zbMATH OpenOpenAlexWikidataFDO

Authors

Publication date 25 November 2015

Published in Mathematical Modelling of Natural Phenomena (Search for Journal in Brave)

Full work available at URL http://www.mmnp-journal.org/10.1051/mmnp/201510507/pdf

zbMATH Keywords

attractorsmetabolic networks

Mathematics Subject Classification ID

Qualitative investigation and simulation of ordinary differential equation models (34C60) Neural networks for/in biological studies, artificial life and related topics (92B20) Biochemistry, molecular biology (92C40)

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Cited in

(10)

• Analysis of metabolic systems with complex slow and fast dynamics
• Algebraic methods for inferring biochemical networks: a maximum likelihood approach
• An improved multi-parametric programming algorithm for flux balance analysis of metabolic networks
• Metabolic networks are NP-hard to reconstruct
• Identifying the parametric occurrence of multiple steady states for some biological networks
• Reduction methods and chaos for quadratic systems of differential equations
• Mathematical Morphology on Soft Sets for Application to Metabolic Networks
• An algorithmic approach to orders of magnitude in a biochemical system
• A geometric approach for analyzing parametric biological systems by exploiting block triangular structure
• Splitting the dynamics of large biochemical interaction networks

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