Autoregressive modeling and feature analysis of DNA sequences

DOI10.1155/S111086570430925XMaRDI QIDQ1773682zbMATH OpenOpenAlexFDO

Authors Niranjan Chakravarthy

Publication date 3 May 2005

Published in EURASIP Journal on Applied Signal Processing (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1155/s111086570430925x

Mathematics Subject Classification ID

Time series, auto-correlation, regression, etc. in statistics (GARCH) (62M10) Biochemistry, molecular biology (92C40)

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(13)

• A discrete autoregressive process as a model for short-range correlations in DNA sequences
• Identification of protein coding regions in the eukaryotic DNA sequences based on marple algorithm and wavelet packets transform
• Comparison of numerical representations of genomic sequences: choosing the best mapping for wavelet analysis
• Autocovariance estimation in the presence of changepoints
• Weighted relative entropy for phylogenetic tree based on 2-step Markov model
• scientific article; zbMATH DE number 3887502 (Why is no real title available?)
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• scientific article; zbMATH DE number 5290463 (Why is no real title available?)
• SNR of DNA sequences mapped by general affine transformations of the indicator sequences
• A multirate DSP structure for the identification of protein-coding regions
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• \(\alpha\)-stable laws for noncoding regions in DNA sequences
• Statistical inference for DNA sequences of promoters: a non-stationary qualitative model

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