Bayesian clustering of DNA sequences using Markov chains and a stochastic partition model
From MaRDI portal
Recommendations
- Deriving non-homogeneous DNA Markov chain models by cluster analysis algorithm minimizing multiple alignment entropy
- A Bayesian Approach to DNA Sequence Segmentation
- Bayesian hidden Markov tree models for clustering genes with shared evolutionary history
- A Bayesian nonparametric model for inferring subclonal populations from structured DNA sequencing data
- Bayesian hidden Markov model for DNA sequence segmentation: a prior sensitivity analysis
- Bayesian bi-clustering methods with applications in computational biology
- Classification of molecular sequence data using Bayesian phylogenetic mixture models
- Analysing grouping of nucleotides in DNA sequences using lumped processes constructed from Markov chains
Cites work
- 10.1162/153244303321897735
- A Bayesian analysis of some nonparametric problems
- A predictive view of Bayesian clustering
- Bayesian clustering by dynamics
- Cluster analysis of gene expression dynamics
- Combinatorial stochastic processes. Ecole d'Eté de Probabilités de Saint-Flour XXXII -- 2002.
- Compressed Genotyping
- Computational discovery of gene regulatory binding motifs: a Bayesian perspective
- Elements of Information Theory
- Ferguson distributions via Polya urn schemes
- Have I seen you before? Principles of Bayesian predictive classification revisited
- Hidden Markov models for bioinformatics
- Hierarchical Dirichlet Processes
- scientific article; zbMATH DE number 3567782 (Why is no real title available?)
- scientific article; zbMATH DE number 774881 (Why is no real title available?)
- Modal clustering in a class of product partition models
- Product partition models for change point problems
- Random partition models and exchangeability for Bayesian identification of population struc\-ture
- Splitting and merging components of a nonconjugate Dirichlet process mixture model
- The Nested Dirichlet Process
- The Number of Partitions of a Set
- Variable length Markov chains
Cited in
(6)- Covariance-based dissimilarity measures applied to clustering wide-sense stationary ergodic processes
- A Bayesian Approach to DNA Sequence Segmentation
- Partition Markov model for multiple processes
- Partitioning gene expression data by data-driven Markov chain Monte Carlo
- Fast Generation of Exchangeable Sequence of Clusters Data
- Classification and clustering of sequencing data using a Poisson model
This page was built for publication: Bayesian clustering of DNA sequences using Markov chains and a stochastic partition model
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q3191810)