Cells Segmentation From 3-D Confocal Images of Early Zebrafish Embryogenesis

DOI10.1109/TIP.2009.2033629MaRDI QIDQ5366288zbMATH OpenOpenAlexWikidataFDO

Authors Cecilia Zanella, Matteo Campana, Barbara Rizzi, Camilo Melani, Gonzalo Sanguinetti, Karol Mikula, Nadine Peyriéras, A. Sarti, Paul Bourgine

Publication date 9 October 2017

Published in IEEE Transactions on Image Processing (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1109/tip.2009.2033629

Mathematics Subject Classification ID

Computational methods for problems pertaining to biology (92-08) Cell biology (92C37) Image processing (compression, reconstruction, etc.) in information and communication theory (94A08)

Cited in

(11)

• 4D segmentation algorithm with application to 3D+time image segmentation
• Nonlinear PDE based numerical methods for cell tracking in zebrafish embryogenesis
• Inflow-implicit/outflow-explicit finite volume methods for solving advection equations
• Numerical algorithm for tracking cell dynamics in 4D biomedical images
• A review on complex system engineering
• Zero-diffusion domains in reaction-diffusion morphogenetic and epidemiologic processes
• 4D numerical schemes for cell image segmentation and tracking
• 4D embryogenesis image analysis using PDE methods of image processing
• Methodology for Reconstructing Early Zebrafish Development From In Vivo Multiphoton Microscopy
• <formula formulatype="inline"><tex Notation="TeX">$3D+t$</tex></formula> Morphological Processing: Applications to Embryogenesis Image Analysis
• 3D image segmentation supported by a point cloud

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