Numerical algorithm for tracking cell dynamics in 4D biomedical images

DOI10.3934/DCDSS.2015.8.953MaRDI QIDQ2515718zbMATH OpenOpenAlexWikidataFDO

Authors Nadine Peyriéras, Róbert Špir, Karol Mikula

Publication date 6 August 2015

Published in Discrete and Continuous Dynamical Systems. Series S (Search for Journal in Brave)

Full work available at URL https://doi.org/10.3934/dcdss.2015.8.953

zbMATH Keywords

4D imagescell dynamicscell trackingdistance functionimage processing

Mathematics Subject Classification ID

PDEs in connection with biology, chemistry and other natural sciences (35Q92) Cell movement (chemotaxis, etc.) (92C17) Biomedical imaging and signal processing (92C55)

Recommendations

• Nonlinear PDE based numerical methods for cell tracking in zebrafish embryogenesis
• 4D numerical schemes for cell image segmentation and tracking
• 4D segmentation algorithm with application to 3D+time image segmentation
• Whole cell tracking through the optimal control of geometric evolution laws
• 4D embryogenesis image analysis using PDE methods of image processing

Cites work

• 4D embryogenesis image analysis using PDE methods of image processing
• 4D numerical schemes for cell image segmentation and tracking
• A Viscosity Solutions Approach to Shape-From-Shading
• Cells Segmentation From 3-D Confocal Images of Early Zebrafish Embryogenesis
• Conformal curvature flows: from phase transitions to active vision
• Counting number of cells and cell segmentation using advection-diffusion equations
• Geodesic active contours
• Image denoising and segmentation via nonlinear diffusion
• Scale space and variational methods in computer vision. Second international conference, SSVM 2009, Voss, Norway, June 1--5, 2009. Proceedings
• Subjective surfaces: A method for completing missing boundaries

Cited in

(9)

• Nonlinear PDE based numerical methods for cell tracking in zebrafish embryogenesis
• Whole cell tracking through the optimal control of geometric evolution laws
• Segmentation of three-dimensional images with parametric active surfaces and topology changes
• Parallel algorithms for segmentation of cellular structures in 2D+time and 3D morphogenesis data
• 4D numerical schemes for cell image segmentation and tracking
• Simulating organogenesis: algorithms for the image-based determination of displacement fields
• Counting number of cells and cell segmentation using advection-diffusion equations
• Interactive similarity analysis for 3D+t cell trajectory data
• Three-dimensional tracking of GLUT4 vesicles in TIRF microscopy

This page was built for publication: Numerical algorithm for tracking cell dynamics in 4D biomedical images

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2515718)