Complexities of human promoter sequences

DOI10.1016/J.JTBI.2007.03.035MaRDI QIDQ2219767zbMATH OpenOpenAlexWikidataFDO

Authors Fangcui Zhao, Huijie Yang, Bing-Hong Wang

Publication date 21 January 2021

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/0704.0158

zbMATH Keywords

complexitydiffusion entropyputative promoter sequences

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

Abstract: By means of the diffusion entropy approach, we detect the scale-invariance characteristics embedded in the 4737 human promoter sequences. The exponent for the scale-invariance is in a wide range of $[0.3,0.9]$, which centered at $delt{a}_c=0.66$. The distribution of the exponent can be separated into left and right branches with respect to the maximum. The left and right branches are asymmetric and can be fitted exactly with Gaussian form with different widths, respectively.

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Cites work

• Analysis of DNA chains by means of factorial moments
• scientific article; zbMATH DE number 1865707 (Why is no real title available?)
• Investigation of thermal denaturation of DNA molecules based on non-equilibrium transport approach
• Nonlinear modelling approach to human promoter sequences
• Revisiting Salerno's sine-Gordon model of DNA: active regions and robustness

Cited in

(2)

• Nonlinear modelling approach to human promoter sequences
• Scaling invariance embedded in very short time series: a factorial moment based diffusion entropy approach

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