EDISON

MaRDI QIDQ20276swMATHCRANFDO

Authors Frank Dondelinger, Sophie Lebre

Last update 21 December 2025

Copyright license GNU General Public License, version 2.0

Software version identifier 1.1.1, 1.0, 1.1, PACKAGES.rds, 1.1.2

Official website http://cran.r-project.org/web/packages/EDISON/index.html

Source code repository https://github.com/cran/EDISON

Description

Package EDISON (Estimation of Directed Interactions from Sequences Of Non-homogeneous gene expression) runs an MCMC simulation to reconstruct networks from time series data, using a non-homogeneous, time-varying dynamic Bayesian network. Networks segments and changepoints are inferred concurrently, and information sharing priors provide a reduction of the inference uncertainty.

Cited in

(5)

• Gene regulatory networks. Methods and protocols
• SIMoNe
• rsprng
• bgsmtr
• Bayesian networks in R. With applications in systems biology

This page was built for software: EDISON