Bayesian networks in R. With applications in systems biology

DOI10.1007/978-1-4614-6446-4zbMATH Open1272.62005OpenAlexW2484145743MaRDI QIDQ4912929FDOQ4912929

Sophie Lèbre, R. Nagarajan, Marco Scutari

Publication date: 2 April 2013

Full work available at URL: https://doi.org/10.1007/978-1-4614-6446-4

Description: The book "Bayesian Networks in R with Applications in Systems Biology" introduces the reader to the essential concepts in Bayesian network modeling and inference. It comes with various examples in the open-source statistical environment R.

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zbMATH Keywords

time seriesBayesian networksmultivariate time seriesparameter learningdynamic Bayesian networks\texttt{R}parallel computinglearning algorithmsinference algorithmsstatic bayesian networks

Mathematics Subject Classification ID

Bayesian inference (62F15) Applications of statistics to biology and medical sciences; meta analysis (62P10) Applications of graph theory (05C90) Software, source code, etc. for problems pertaining to statistics (62-04) Systems biology, networks (92C42) Theory of languages and software systems (knowledge-based systems, expert systems, etc.) for artificial intelligence (68T35) Research exposition (monographs, survey articles) pertaining to statistics (62-02) Research exposition (monographs, survey articles) pertaining to biology (92-02)

Cited In (14)

• Compatible priors for model selection of high-dimensional Gaussian DAGs
• Title not available (Why is that?)
• Bayesian sample size determination for causal discovery
• Biomedical applications of Bayesian networks
• Learning Markov equivalence classes of directed acyclic graphs: an objective Bayes approach
• Equivalence class selection of categorical graphical models
• Hailfinder
• Bayesian networks and the assessment of universities' value added
• Title not available (Why is that?)
• Inference of genetic regulatory networks with regulatory hubs using vector autoregressions and automatic relevance determination with model selections
• Bayesian optimal experimental design for inferring causal structure
• Title not available (Why is that?)
• Peter-Clark algorithm
• AMP Chain Graphs: Minimal Separators and Structure Learning Algorithms

Uses Software

• R
• vars
• SIMoNe
• penalized
• graph
• rpvm
• Rmpi
• lars
• Rgraphviz
• bnlearn
• EDISON
• gRain
• G1DBN
• rsprng
• snow

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