Fast wavelet based functional models for transcriptome analysis with tiling arrays

DOI10.2202/1544-6115.1726MaRDI QIDQ2921245zbMATH OpenOpenAlexWikidataFDO

Authors Lieven Clement, Kristof De Beuf, Olivier Thas, Marnik Vuylsteke, Rafael A. Irizarry, Ciprian M. Crainiceanu

Publication date 8 October 2014

Published in Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Full work available at URL http://europepmc.org/articles/pmc3750750

zbMATH Keywords

adaptive regularizationArabidopsis thalianadifferential expressiongenomicstiling microarraytranscript discoverywavelets

Mathematics Subject Classification ID

General biostatistics (92B15)

Recommendations

• Unsupervised classification for tiling arrays: chip-chip and transcriptome
• Research in Computational Molecular Biology
• Doubly stochastic continuous-time hidden Markov approach for analyzing genome tiling arrays
• Scan statistics analysis for detection of introns in time-course tiling array data
• Linear Models and Empirical Bayes Methods for Assessing Differential Expression in Microarray Experiments

Cited in

(6)

• Function-on-function regression for the identification of epigenetic regions exhibiting windows of susceptibility to environmental exposures
• Unsupervised classification for tiling arrays: chip-chip and transcriptome
• scientific article; zbMATH DE number 5583617 (Why is no real title available?)
• Research in Computational Molecular Biology
• Wavelet-based genetic association analysis of functional phenotypes arising from high-throughput sequencing assays
• Doubly stochastic continuous-time hidden Markov approach for analyzing genome tiling arrays

This page was built for publication: Fast wavelet based functional models for transcriptome analysis with tiling arrays

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2921245)