Finite element approximation to a finite-size modified Poisson-Boltzmann equation

DOI10.1007/S10915-010-9441-7MaRDI QIDQ649960zbMATH OpenOpenAlexFDO

Authors Jehanzeb Hameed Chaudhry, Stephen D. Bond, Luke Olson

Publication date 25 November 2011

Published in Journal of Scientific Computing (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s10915-010-9441-7

zbMATH Keywords

finite elementsPoisson-BoltzmannPoisson-Bikerman

Mathematics Subject Classification ID

Electro- and magnetostatics (78A30) Finite element, Galerkin and related methods applied to problems in optics and electromagnetic theory (78M10)

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• Finite volume element method for predicting electrostatics of a biomolecule immersed in an ionic solvent

Cites work

• scientific article; zbMATH DE number 1082719 (Why is no real title available?)
• scientific article; zbMATH DE number 3044887 (Why is no real title available?)
• A mortar finite element approximation for the linear Poisson-Boltzmann equation
• A new minimization protocol for solving nonlinear Poisson-Boltzmann mortar finite element equation
• Adaptive numerical treatment of elliptic systems on manifolds
• Convex functional analysis
• Elliptic partial differential equations of second order
• Finite Elemente
• Introduction to Numerical Continuation Methods
• Ion steric effects on electrophoresis of a colloidal particle
• Minimization of Electrostatic Free Energy and the Poisson–Boltzmann Equation for Molecular Solvation with Implicit Solvent
• The Finite Element Approximation of the Nonlinear Poisson–Boltzmann Equation
• Theoretical Numerical Analysis
• Variational Analysis in Sobolev andBVSpaces

Cited in

(15)

• Weak formulations of the nonlinear Poisson-Boltzmann equation in biomolecular electrostatics
• A mortar finite element approximation for the linear Poisson-Boltzmann equation
• On the analysis and application of an ion size-modified Poisson-Boltzmann equation
• Goal-oriented adaptivity and multilevel preconditioning for the Poisson-Boltzmann equation
• PB-Steric Equations: A General Model of Poisson–Boltzmann Equations
• Mixed finite element analysis for a modified Poisson-Fermi interface problem accounting for electrostatic correlations
• The Finite Element Approximation of the Nonlinear Poisson–Boltzmann Equation
• Generalized Poisson-Boltzmann equation taking into account ionic interaction and steric effects
• Dynamics of ionic flows via Poisson-Nernst-Planck systems with local hard-sphere potentials: competition between cations
• A hybrid solver of size modified Poisson-Boltzmann equation by domain decomposition, finite element, and finite difference
• Numerical methods for the Poisson-Fermi equation in electrolytes
• A posteriori analysis and efficient refinement strategies for the Poisson-Boltzmann equation
• Ion size effects on individual fluxes via Poisson-Nernst-Planck systems with Bikerman's local hard-sphere potential: analysis without electroneutrality boundary conditions
• A finite difference method and analysis for 2D nonlinear Poisson-Boltzmann equations
• A new linear Poisson-Boltzmann equation and finite element solver by solution decomposition approach

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• APBS
• SG

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