Finite sample effects in sequence analysis

DOI10.1016/0960-0779(94)90020-5MaRDI QIDQ1321726zbMATH OpenOpenAlexFDO

Authors Hanspeter Herzel, Armin O. Schmitt, Werner Ebeling

Publication date 28 April 1994

Published in Chaos, Solitons and Fractals (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/0960-0779(94)90020-5

zbMATH Keywords

Markov stringsword-entropiestransinformation functiontexts from natural languagessymbol sequencesrank-order representationsrank order statisticspower-law distributionmutual informationasymptotic equidistributiongenetic sequencesfinite size effectsexponential distributionequidistributionentropyDNA sequencesBernoulli strings

Mathematics Subject Classification ID

Statistical aspects of information-theoretic topics (62B10) Applications of statistics to biology and medical sciences; meta analysis (62P10) Applications of statistics (62P99)

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Cites work

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• scientific article; zbMATH DE number 3143968 (Why is no real title available?)
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• scientific article; zbMATH DE number 51561 (Why is no real title available?)
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• On grammars, complexity, and information measures of biological macromolecules
• The Basic Theorems of Information Theory
• The multiple codes of nucleotide sequences
• Toward a quantitative theory of self-generated complexity
• Word frequency and entropy of symbolic sequences: A dynamical perspective

Cited in

(25)

• Prediction and entropy of nonlinear dynamical systems and symbolic sequences with LRO
• A discrete autoregressive process as a model for short-range correlations in DNA sequences
• Entropy concepts and DNA investigations
• Information transfer in continuous processes
• Complexity principle of extremality in evolution of living organisms by information-theoretic entropy
• Hurst exponent of very long birth time series in XX century Romania. Social and religious aspects
• Estimating the errors on measured entropy and mutual information
• Testing the order of discrete Markov chains using surrogate data
• Network inference combining mutual information rate and statistical tests
• Rényi continuous entropy of DNA sequences
• Study of DNA binding sites using the Rényi parametric entropy measure
• Guessing probability distributions from small samples
• Analysis and visualization of seismic data using mutual information
• Analysis of symbolic sequences using the Jensen-Shannon divergence
• Evaluating accuracy of community detection using the relative normalized mutual information
• A Statistical Analysts of Serially Balanced Sequences: First Order Residuals Proportional to Direct Effects
• scientific article; zbMATH DE number 4062892 (Why is no real title available?)
• Dynamical Analysis of Time Series by Statistical Tests
• PARTITION-BASED ENTROPIES OF DETERMINISTIC AND STOCHASTIC MAPS
• ENTROPY AND COMPLEXITY ANALYSIS OF INTRACRANIALLY RECORDED EEG
• scientific article; zbMATH DE number 2100607 (Why is no real title available?)
• On the structures revealed from symbol sequences
• Successful network inference from time-series data using mutual information rate
• A review of symbolic dynamics and symbolic reconstruction of dynamical systems
• Measuring chaos in the Lorenz and Rössler models: fidelity tests for reservoir computing

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