Fixed Parameter Tractable Alignment of RNA Structures Including Arbitrary Pseudoknots
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Cites work
- scientific article; zbMATH DE number 2185647 (Why is no real title available?)
- Finding Common RNA Pseudoknot Structures in Polynomial Time
- Graph-Theoretic Concepts in Computer Science
- Simultaneous Solution of the RNA Folding, Alignment and Protosequence Problems
- Structural Alignment of Pseudoknotted RNA
Cited in
(8)- Forest alignment with affine gaps and anchors, applied in RNA structure comparison
- Fast RNA structure alignment for crossing input structures
- Extending the Hardness of RNA Secondary Structure Comparison
- New models and algorithms for RNA pseudoknot order assignment
- Forest Alignment with Affine Gaps and Anchors
- Fast RNA Structure Alignment for Crossing Input Structures
- Pseudoknot-generating operation
- Compositional properties of alignments
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